Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPCS3P61009 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPCS3P61009 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPCS3P61009 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPCS3P61009 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.65■□□□□ 0.9
SPCS3P61009 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPCS3P61009 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPCS3P61009 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPCS3P61009 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.64■□□□□ 0.9
SPCS3P61009 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SPCS3P61009 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPCS3P61009 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.64■□□□□ 0.89
SPCS3P61009 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPCS3P61009 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPCS3P61009 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPCS3P61009 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPCS3P61009 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPCS3P61009 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPCS3P61009 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPCS3P61009 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPCS3P61009 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPCS3P61009 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.62■□□□□ 0.89
SPCS3P61009 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPCS3P61009 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPCS3P61009 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPCS3P61009 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPCS3P61009 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPCS3P61009 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.61■□□□□ 0.89
SPCS3P61009 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPCS3P61009 AC127502.1-201ENST00000399971 1502 ntBASIC20.6■□□□□ 0.89
SPCS3P61009 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SPCS3P61009 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.6■□□□□ 0.89
SPCS3P61009 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPCS3P61009 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
SPCS3P61009 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPCS3P61009 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPCS3P61009 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPCS3P61009 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPCS3P61009 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
SPCS3P61009 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
SPCS3P61009 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SPCS3P61009 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SPCS3P61009 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SPCS3P61009 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPCS3P61009 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPCS3P61009 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.58■□□□□ 0.89
SPCS3P61009 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPCS3P61009 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.57■□□□□ 0.88
SPCS3P61009 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPCS3P61009 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPCS3P61009 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SPCS3P61009 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPCS3P61009 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPCS3P61009 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.56■□□□□ 0.88
SPCS3P61009 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPCS3P61009 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPCS3P61009 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPCS3P61009 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SPCS3P61009 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPCS3P61009 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPCS3P61009 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPCS3P61009 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPCS3P61009 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPCS3P61009 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SPCS3P61009 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPCS3P61009 LINC01003-201ENST00000564834 1764 ntBASIC20.54■□□□□ 0.88
SPCS3P61009 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPCS3P61009 AL391121.1-201ENST00000607967 1349 ntBASIC20.53■□□□□ 0.88
SPCS3P61009 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPCS3P61009 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.52■□□□□ 0.88
SPCS3P61009 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPCS3P61009 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPCS3P61009 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.52■□□□□ 0.88
SPCS3P61009 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPCS3P61009 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.51■□□□□ 0.87
SPCS3P61009 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPCS3P61009 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SPCS3P61009 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPCS3P61009 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPCS3P61009 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SPCS3P61009 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SPCS3P61009 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPCS3P61009 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPCS3P61009 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SPCS3P61009 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPCS3P61009 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPCS3P61009 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.48■□□□□ 0.87
SPCS3P61009 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
SPCS3P61009 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPCS3P61009 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SPCS3P61009 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPCS3P61009 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPCS3P61009 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPCS3P61009 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPCS3P61009 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SPCS3P61009 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SPCS3P61009 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SPCS3P61009 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.46■□□□□ 0.87
SPCS3P61009 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPCS3P61009 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms