Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
NR1H2P55055 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
NR1H2P55055 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.04■■□□□ 1.44
NR1H2P55055 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NR1H2P55055 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
NR1H2P55055 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
NR1H2P55055 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
NR1H2P55055 AP006261.1-201ENST00000584783 668 ntBASIC24.02■■□□□ 1.44
NR1H2P55055 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NR1H2P55055 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NR1H2P55055 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.02■■□□□ 1.44
NR1H2P55055 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
NR1H2P55055 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NR1H2P55055 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NR1H2P55055 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24■■□□□ 1.43
NR1H2P55055 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24■■□□□ 1.43
NR1H2P55055 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
NR1H2P55055 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.98■■□□□ 1.43
NR1H2P55055 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.98■■□□□ 1.43
NR1H2P55055 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NR1H2P55055 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
NR1H2P55055 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NR1H2P55055 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.97■■□□□ 1.43
NR1H2P55055 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
NR1H2P55055 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.97■■□□□ 1.43
NR1H2P55055 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
NR1H2P55055 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NR1H2P55055 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
NR1H2P55055 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
NR1H2P55055 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.96■■□□□ 1.43
NR1H2P55055 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NR1H2P55055 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NR1H2P55055 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
NR1H2P55055 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
NR1H2P55055 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NR1H2P55055 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.94■■□□□ 1.42
NR1H2P55055 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NR1H2P55055 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.94■■□□□ 1.42
NR1H2P55055 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NR1H2P55055 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NR1H2P55055 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.93■■□□□ 1.42
NR1H2P55055 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NR1H2P55055 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NR1H2P55055 BX255925.1-201ENST00000566954 1854 ntBASIC23.92■■□□□ 1.42
NR1H2P55055 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NR1H2P55055 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.92■■□□□ 1.42
NR1H2P55055 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NR1H2P55055 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NR1H2P55055 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.91■■□□□ 1.42
NR1H2P55055 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
NR1H2P55055 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NR1H2P55055 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
NR1H2P55055 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
NR1H2P55055 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
NR1H2P55055 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.89■■□□□ 1.42
NR1H2P55055 AL162393.1-201ENST00000437852 946 ntBASIC23.89■■□□□ 1.41
NR1H2P55055 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NR1H2P55055 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.89■■□□□ 1.41
NR1H2P55055 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NR1H2P55055 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
NR1H2P55055 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NR1H2P55055 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.87■■□□□ 1.41
NR1H2P55055 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
NR1H2P55055 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.86■■□□□ 1.41
NR1H2P55055 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.86■■□□□ 1.41
NR1H2P55055 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.86■■□□□ 1.41
NR1H2P55055 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
NR1H2P55055 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.85■■□□□ 1.41
NR1H2P55055 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NR1H2P55055 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
NR1H2P55055 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.41
NR1H2P55055 MIR3665-201ENST00000578708 105 ntBASIC23.83■■□□□ 1.41
NR1H2P55055 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NR1H2P55055 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NR1H2P55055 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
NR1H2P55055 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NR1H2P55055 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NR1H2P55055 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NR1H2P55055 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.82■■□□□ 1.4
NR1H2P55055 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NR1H2P55055 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.81■■□□□ 1.4
NR1H2P55055 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NR1H2P55055 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.81■■□□□ 1.4
NR1H2P55055 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.81■■□□□ 1.4
NR1H2P55055 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
NR1H2P55055 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NR1H2P55055 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NR1H2P55055 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NR1H2P55055 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.8■■□□□ 1.4
NR1H2P55055 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NR1H2P55055 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NR1H2P55055 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.8■■□□□ 1.4
NR1H2P55055 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.79■■□□□ 1.4
NR1H2P55055 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NR1H2P55055 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NR1H2P55055 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NR1H2P55055 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NR1H2P55055 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.78■■□□□ 1.4
NR1H2P55055 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NR1H2P55055 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms