Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 MET13YGL125W 1803 nt6.52□□□□□ -1.37
CDC40P40968 POB3YML069W 1659 nt6.52□□□□□ -1.37
CDC40P40968 NMD5YJR132W 3147 nt6.51□□□□□ -1.37
CDC40P40968 YIL177CYIL177C 5277 nt6.51□□□□□ -1.37
CDC40P40968 YNL040WYNL040W 1371 nt6.5□□□□□ -1.37
CDC40P40968 ADE8YDR408C 645 nt6.5□□□□□ -1.37
CDC40P40968 SWT21YNL187W 1074 nt6.5□□□□□ -1.37
CDC40P40968 YCR061WYCR061W 1896 nt6.49□□□□□ -1.37
CDC40P40968 LYS20YDL182W 1287 nt6.49□□□□□ -1.37
CDC40P40968 IMO32YGR031W 1029 nt6.49□□□□□ -1.37
CDC40P40968 OPI3YJR073C 621 nt6.49□□□□□ -1.37
CDC40P40968 SGF73YGL066W 1974 nt6.49□□□□□ -1.37
CDC40P40968 RIB2YOL066C 1776 nt6.49□□□□□ -1.37
CDC40P40968 FUN14YAL008W 597 nt6.48□□□□□ -1.37
CDC40P40968 ADH1YOL086C 1047 nt6.48□□□□□ -1.37
CDC40P40968 YOR300WYOR300W 309 nt6.47□□□□□ -1.37
CDC40P40968 GAL3YDR009W 1563 nt6.47□□□□□ -1.37
CDC40P40968 CKI1YLR133W 1749 nt6.47□□□□□ -1.37
CDC40P40968 APS2YJR058C 444 nt6.46□□□□□ -1.38
CDC40P40968 YNR029CYNR029C 1290 nt6.46□□□□□ -1.38
CDC40P40968 HXT13YEL069C 1695 nt6.45□□□□□ -1.38
CDC40P40968 SBP1YHL034C 885 nt6.45□□□□□ -1.38
CDC40P40968 YHC3YJL059W 1227 nt6.45□□□□□ -1.38
CDC40P40968 YJL195CYJL195C 702 nt6.45□□□□□ -1.38
CDC40P40968 TIF3YPR163C 1311 nt6.45□□□□□ -1.38
CDC40P40968 RPL2AYFR031C-A 765 nt6.44□□□□□ -1.38
CDC40P40968 YKL053WYKL053W 375 nt6.44□□□□□ -1.38
CDC40P40968 RGT2YDL138W 2292 nt6.43□□□□□ -1.38
CDC40P40968 YER137CYER137C 447 nt6.43□□□□□ -1.38
CDC40P40968 YNL140CYNL140C 570 nt6.43□□□□□ -1.38
CDC40P40968 MRN1YPL184C 1839 nt6.42□□□□□ -1.38
CDC40P40968 ADH6YMR318C 1083 nt6.42□□□□□ -1.38
CDC40P40968 YPL041CYPL041C 624 nt6.42□□□□□ -1.38
CDC40P40968 RBS1YDL189W 1374 nt6.42□□□□□ -1.38
CDC40P40968 MSB3YNL293W 1902 nt6.41□□□□□ -1.38
CDC40P40968 PAR32YDL173W 888 nt6.41□□□□□ -1.38
CDC40P40968 YEL008WYEL008W 381 nt6.41□□□□□ -1.38
CDC40P40968 YIP4YGL198W 708 nt6.41□□□□□ -1.38
CDC40P40968 ADE17YMR120C 1779 nt6.41□□□□□ -1.38
CDC40P40968 SAN1YDR143C 1833 nt6.41□□□□□ -1.38
CDC40P40968 YBL111CYBL111C 2004 nt6.4□□□□□ -1.38
CDC40P40968 YKR018CYKR018C 2178 nt6.4□□□□□ -1.38
CDC40P40968 FCP1YMR277W 2199 nt6.4□□□□□ -1.38
CDC40P40968 YLR030WYLR030W 792 nt6.4□□□□□ -1.38
CDC40P40968 BNA3YJL060W 1335 nt6.4□□□□□ -1.39
CDC40P40968 YFR036W-AYFR036W-A 651 nt6.39□□□□□ -1.39
CDC40P40968 STE4YOR212W 1272 nt6.39□□□□□ -1.39
CDC40P40968 GFA1YKL104C 2154 nt6.39□□□□□ -1.39
CDC40P40968 TMS1YDR105C 1422 nt6.39□□□□□ -1.39
CDC40P40968 CDC13YDL220C 2775 nt6.39□□□□□ -1.39
CDC40P40968 YJL009WYJL009W 327 nt6.38□□□□□ -1.39
CDC40P40968 LRO1YNR008W 1986 nt6.38□□□□□ -1.39
CDC40P40968 MEP1YGR121C 1479 nt6.37□□□□□ -1.39
CDC40P40968 GLY1YEL046C 1164 nt6.37□□□□□ -1.39
CDC40P40968 YOR041CYOR041C 432 nt6.37□□□□□ -1.39
CDC40P40968 RSC9YML127W 1746 nt6.36□□□□□ -1.39
CDC40P40968 RPL12BYDR418W 498 nt6.36□□□□□ -1.39
CDC40P40968 INO1YJL153C 1602 nt6.36□□□□□ -1.39
CDC40P40968 ATG22YCL038C 1587 nt6.35□□□□□ -1.39
CDC40P40968 TVP23YDR084C 600 nt6.35□□□□□ -1.39
CDC40P40968 HGH1YGR187C 1185 nt6.35□□□□□ -1.39
CDC40P40968 INM1YHR046C 888 nt6.35□□□□□ -1.39
CDC40P40968 PMT1YDL095W 2454 nt6.34□□□□□ -1.39
CDC40P40968 YBR056WYBR056W 1506 nt6.34□□□□□ -1.39
CDC40P40968 PRP2YNR011C 2631 nt6.33□□□□□ -1.4
CDC40P40968 CCT5YJR064W 1689 nt6.33□□□□□ -1.4
CDC40P40968 PRB1YEL060C 1908 nt6.33□□□□□ -1.4
CDC40P40968 BUD31YCR063W 474 nt6.33□□□□□ -1.4
CDC40P40968 YLR349WYLR349W 507 nt6.33□□□□□ -1.4
CDC40P40968 APT1YML022W 564 nt6.33□□□□□ -1.4
CDC40P40968 YPR126CYPR126C 309 nt6.33□□□□□ -1.4
CDC40P40968 IML3YBR107C 738 nt6.33□□□□□ -1.4
CDC40P40968 EHD3YDR036C 1503 nt6.33□□□□□ -1.4
CDC40P40968 CIT3YPR001W 1461 nt6.33□□□□□ -1.4
CDC40P40968 TGL5YOR081C 2250 nt6.32□□□□□ -1.4
CDC40P40968 SNZ1YMR096W 894 nt6.32□□□□□ -1.4
CDC40P40968 PPS1YBR276C 2424 nt6.31□□□□□ -1.4
CDC40P40968 SHO1YER118C 1104 nt6.31□□□□□ -1.4
CDC40P40968 KTR4YBR199W 1395 nt6.31□□□□□ -1.4
CDC40P40968 SEC24YIL109C 2781 nt6.3□□□□□ -1.4
CDC40P40968 SPS100YHR139C 981 nt6.3□□□□□ -1.4
CDC40P40968 GPA1YHR005C 1419 nt6.3□□□□□ -1.4
CDC40P40968 PDC5YLR134W 1692 nt6.3□□□□□ -1.4
CDC40P40968 CPD1YGR247W 720 nt6.29□□□□□ -1.4
CDC40P40968 TOD6YBL054W 1578 nt6.29□□□□□ -1.4
CDC40P40968 MAL31YBR298C 1845 nt6.29□□□□□ -1.4
CDC40P40968 GAS1YMR307W 1680 nt6.29□□□□□ -1.4
CDC40P40968 AMF1YOR378W 1548 nt6.28□□□□□ -1.4
CDC40P40968 PTC6YCR079W 1329 nt6.27□□□□□ -1.41
CDC40P40968 CTI6YPL181W 1521 nt6.27□□□□□ -1.41
CDC40P40968 YGR068W-AYGR068W-A 96 nt6.27□□□□□ -1.41
CDC40P40968 HSM3YBR272C 1443 nt6.26□□□□□ -1.41
CDC40P40968 RMD8YFR048W 1989 nt6.26□□□□□ -1.41
CDC40P40968 RUP1YOR138C 2016 nt6.26□□□□□ -1.41
CDC40P40968 AIM3YBR108W 2844 nt6.26□□□□□ -1.41
CDC40P40968 CKB1YGL019W 837 nt6.25□□□□□ -1.41
CDC40P40968 TDA4YJR116W 840 nt6.25□□□□□ -1.41
CDC40P40968 IDP3YNL009W 1263 nt6.25□□□□□ -1.41
CDC40P40968 YNR001W-AYNR001W-A 219 nt6.25□□□□□ -1.41
CDC40P40968 MHF1YOL086W-A 273 nt6.25□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 24.5 ms