RNA–Protein interactions for RNA: YDL182W

LYS20, Transcript of Homocitrate synthase isozyme, yeastyeast

Gene LYS20, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LYS20YDL182W MON2P48563 1636 aaPredicted RBP17.39■□□□□ 0.37
LYS20YDL182W INO80P53115 1489 aa17.31■□□□□ 0.36
LYS20YDL182W SWR1Q05471 1514 aa16.6■□□□□ 0.25
LYS20YDL182W DNA2P38859 1522 aa16.55■□□□□ 0.24
LYS20YDL182W TY1B-DR4Q07793 1604 aa16.52■□□□□ 0.24
LYS20YDL182W TCB3Q03640 1545 aaKnown RBP16.52■□□□□ 0.24
LYS20YDL182W SGS1P35187 1447 aa16.37■□□□□ 0.21
LYS20YDL182W KOG1P38873 1557 aa16.27■□□□□ 0.2
LYS20YDL182W HSL1P34244 1518 aa15.95■□□□□ 0.14
LYS20YDL182W SPT6P23615 1451 aaKnown RBP15.91■□□□□ 0.14
LYS20YDL182W RSE1Q04693 1361 aaKnown RBP15.78■□□□□ 0.12
LYS20YDL182W SPA2P23201 1466 aaKnown RBP15.7■□□□□ 0.1
LYS20YDL182W HIR3P47171 1648 aa15.61■□□□□ 0.09
LYS20YDL182W ECM5Q03214 1411 aa15.52■□□□□ 0.08
LYS20YDL182W THO2P53552 1597 aaKnown RBP15.41■□□□□ 0.06
LYS20YDL182W BUD4P47136 1447 aa15.4■□□□□ 0.06
LYS20YDL182W XRN1P22147 1528 aaKnown RBP15.32■□□□□ 0.04
LYS20YDL182W MDS3P53094 1487 aa15.26■□□□□ 0.03
LYS20YDL182W PEP1P32319 1579 aa15.15■□□□□ 0.02
LYS20YDL182W SSN2P38931 1420 aa15.13■□□□□ 0.01
LYS20YDL182W ATG2P53855 1592 aa15.08■□□□□ 0
LYS20YDL182W REV3P14284 1504 aa15.05■□□□□ -0
LYS20YDL182W MTC1P47018 478 aaKnown RBP15.02■□□□□ -0
LYS20YDL182W SIN3P22579 1536 aa14.87□□□□□ -0.03
LYS20YDL182W TAF2P23255 1407 aa14.85□□□□□ -0.03
LYS20YDL182W BPT1P14772 1559 aa14.84□□□□□ -0.03
LYS20YDL182W SKI3P17883 1432 aaKnown RBP14.79□□□□□ -0.04
LYS20YDL182W SSK2P53599 1579 aa14.75□□□□□ -0.05
LYS20YDL182W ESP1Q03018 1630 aa14.69□□□□□ -0.06
LYS20YDL182W YCF1P39109 1515 aaKnown RBP14.59□□□□□ -0.07
LYS20YDL182W DRS1P32892 752 aaKnown RBP14.55□□□□□ -0.08
LYS20YDL182W UFD4P33202 1483 aa14.54□□□□□ -0.08
LYS20YDL182W SCC2Q04002 1493 aa14.49□□□□□ -0.09
LYS20YDL182W YPK9Q12697 1472 aa14.49□□□□□ -0.09
LYS20YDL182W MYO2P19524 1574 aaKnown RBP14.43□□□□□ -0.1
LYS20YDL182W RPO31P04051 1460 aa14.4□□□□□ -0.1
LYS20YDL182W TY2B-LR1P0C2J3 1770 aa14.34□□□□□ -0.11
LYS20YDL182W TY2B-FP0CX63 1770 aa14.34□□□□□ -0.11
LYS20YDL182W TY2B-GR2P0CX64 1770 aa14.34□□□□□ -0.11
LYS20YDL182W TY2B-CP25384 1770 aa14.34□□□□□ -0.11
LYS20YDL182W TY2B-DR2Q03494 1770 aa14.34□□□□□ -0.11
LYS20YDL182W TY1B-DR1Q03855 1755 aa14.34□□□□□ -0.11
LYS20YDL182W TY2B-DR3Q07791 1770 aaKnown RBP14.34□□□□□ -0.11
LYS20YDL182W TY2B-OR1Q12113 1770 aa14.34□□□□□ -0.11
LYS20YDL182W TY2B-DR1Q12472 1770 aa14.34□□□□□ -0.11
LYS20YDL182W TY2B-OR2Q12501 1770 aa14.34□□□□□ -0.11
LYS20YDL182W CDC25P04821 1589 aa14.3□□□□□ -0.12
LYS20YDL182W CHD1P32657 1468 aa14.28□□□□□ -0.12
LYS20YDL182W TY1B-BRQ12193 1756 aa14.28□□□□□ -0.12
LYS20YDL182W TY1B-GR3Q12316 1755 aa14.28□□□□□ -0.12
LYS20YDL182W TY1B-ORQ92393 1755 aa14.28□□□□□ -0.12
LYS20YDL182W DNF1P32660 1571 aa14.26□□□□□ -0.13
LYS20YDL182W ESC1Q03661 1658 aaKnown RBP14.22□□□□□ -0.13
LYS20YDL182W TY2B-BQ12491 1770 aa14.17□□□□□ -0.14
LYS20YDL182W PAN1P32521 1480 aa14.15□□□□□ -0.14
LYS20YDL182W TOP2P06786 1428 aaKnown RBP14.15□□□□□ -0.14
LYS20YDL182W MET5P47169 1442 aa14.15□□□□□ -0.14
LYS20YDL182W TY1B-DR3Q99231 1755 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-HO13535 1793 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-DR5P0C2I2 1755 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-DR6P0C2I3 1755 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-LR2P0C2I5 1755 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-LR3P0C2I6 1755 aaKnown RBP14.14□□□□□ -0.15
LYS20YDL182W TY1B-PR1P0C2I9 1755 aaKnown RBP14.14□□□□□ -0.15
LYS20YDL182W TY1B-PR2P0C2J0 1756 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-PR3P0C2J1 1755 aaKnown RBP14.14□□□□□ -0.15
LYS20YDL182W TY1B-JR1P47098 1755 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-ML2Q03434 1755 aaKnown RBP14.14□□□□□ -0.15
LYS20YDL182W TY1B-ER1Q03612 1755 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-ML1Q04711 1755 aaKnown RBP14.14□□□□□ -0.15
LYS20YDL182W TY1B-GR2Q12269 1755 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-OLQ12273 1755 aa14.14□□□□□ -0.15
LYS20YDL182W TY1B-PLQ12414 1755 aaKnown RBP14.14□□□□□ -0.15
LYS20YDL182W RQC2Q12532 1038 aaKnown RBP14.12□□□□□ -0.15
LYS20YDL182W RPA190P10964 1664 aaKnown RBP14.1□□□□□ -0.15
LYS20YDL182W RKR1Q04781 1562 aa14.1□□□□□ -0.15
LYS20YDL182W POL1P13382 1468 aa14.04□□□□□ -0.16
LYS20YDL182W MMS22Q06164 1454 aa14.02□□□□□ -0.16
LYS20YDL182W LTE1P07866 1435 aa13.96□□□□□ -0.18
LYS20YDL182W YOR1P53049 1477 aa13.93□□□□□ -0.18
LYS20YDL182W STU1P38198 1513 aa13.93□□□□□ -0.18
LYS20YDL182W SMC4Q12267 1418 aa13.92□□□□□ -0.18
LYS20YDL182W BNI1P41832 1953 aa13.92□□□□□ -0.18
LYS20YDL182W TRM732Q03496 1420 aa13.89□□□□□ -0.19
LYS20YDL182W SPP41P38904 1435 aa13.86□□□□□ -0.19
LYS20YDL182W YRF1-1P0CX20 1796 aa13.86□□□□□ -0.19
LYS20YDL182W YRF1-5P0CX21 1796 aa13.86□□□□□ -0.19
LYS20YDL182W YRF1-8P0CX22 1796 aa13.86□□□□□ -0.19
LYS20YDL182W TY1B-JR2P47100 1755 aaKnown RBP13.86□□□□□ -0.19
LYS20YDL182W TY1B-ER2Q03619 1755 aa13.86□□□□□ -0.19
LYS20YDL182W TY1B-MR1Q04214 1755 aa13.86□□□□□ -0.19
LYS20YDL182W TY1B-MR2Q04670 1755 aaKnown RBP13.86□□□□□ -0.19
LYS20YDL182W TY1B-LR1Q12088 1755 aaKnown RBP13.86□□□□□ -0.19
LYS20YDL182W TY1B-NL1Q12112 1755 aa13.86□□□□□ -0.19
LYS20YDL182W TY1B-GR1Q12141 1755 aa13.86□□□□□ -0.19
LYS20YDL182W TY1B-BLQ12490 1755 aa13.86□□□□□ -0.19
LYS20YDL182W GEA2P39993 1459 aaKnown RBP13.8□□□□□ -0.2
LYS20YDL182W ITT1Q04638 464 aa13.79□□□□□ -0.2
LYS20YDL182W NUP159P40477 1460 aa13.79□□□□□ -0.2
LYS20YDL182W NTE1Q04958 1679 aa13.77□□□□□ -0.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms