RNA–Protein interactions for RNA: YLR133W

CKI1, Transcript of Choline kinase, yeastyeast

Gene CKI1, Length 1,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKI1YLR133W INO80P53115 1489 aa14.39□□□□□ -0.11
CKI1YLR133W MON2P48563 1636 aaPredicted RBP14.39□□□□□ -0.11
CKI1YLR133W SGS1P35187 1447 aa13.94□□□□□ -0.18
CKI1YLR133W TCB3Q03640 1545 aaKnown RBP13.93□□□□□ -0.18
CKI1YLR133W TY1B-DR4Q07793 1604 aa13.83□□□□□ -0.2
CKI1YLR133W SWR1Q05471 1514 aa13.82□□□□□ -0.2
CKI1YLR133W DNA2P38859 1522 aa13.72□□□□□ -0.21
CKI1YLR133W KOG1P38873 1557 aa13.55□□□□□ -0.24
CKI1YLR133W HSL1P34244 1518 aa13.41□□□□□ -0.26
CKI1YLR133W SPT6P23615 1451 aaKnown RBP13.4□□□□□ -0.26
CKI1YLR133W SPA2P23201 1466 aaKnown RBP13.28□□□□□ -0.28
CKI1YLR133W HIR3P47171 1648 aa13.14□□□□□ -0.31
CKI1YLR133W RSE1Q04693 1361 aaKnown RBP13.06□□□□□ -0.32
CKI1YLR133W ECM5Q03214 1411 aa13.02□□□□□ -0.32
CKI1YLR133W SSN2P38931 1420 aa12.96□□□□□ -0.34
CKI1YLR133W XRN1P22147 1528 aaKnown RBP12.95□□□□□ -0.34
CKI1YLR133W BUD4P47136 1447 aa12.94□□□□□ -0.34
CKI1YLR133W THO2P53552 1597 aaKnown RBP12.93□□□□□ -0.34
CKI1YLR133W MDS3P53094 1487 aa12.76□□□□□ -0.37
CKI1YLR133W REV3P14284 1504 aa12.71□□□□□ -0.38
CKI1YLR133W PEP1P32319 1579 aa12.68□□□□□ -0.38
CKI1YLR133W ATG2P53855 1592 aa12.64□□□□□ -0.39
CKI1YLR133W SIN3P22579 1536 aa12.58□□□□□ -0.4
CKI1YLR133W TAF2P23255 1407 aa12.58□□□□□ -0.4
CKI1YLR133W DRS1P32892 752 aaKnown RBP12.57□□□□□ -0.4
CKI1YLR133W MTC1P47018 478 aaKnown RBP12.54□□□□□ -0.4
CKI1YLR133W SKI3P17883 1432 aaKnown RBP12.51□□□□□ -0.41
CKI1YLR133W SSK2P53599 1579 aa12.48□□□□□ -0.41
CKI1YLR133W BPT1P14772 1559 aa12.42□□□□□ -0.42
CKI1YLR133W ESP1Q03018 1630 aa12.41□□□□□ -0.42
CKI1YLR133W UFD4P33202 1483 aa12.27□□□□□ -0.45
CKI1YLR133W YPK9Q12697 1472 aa12.27□□□□□ -0.45
CKI1YLR133W MYO2P19524 1574 aaKnown RBP12.26□□□□□ -0.45
CKI1YLR133W SCC2Q04002 1493 aa12.23□□□□□ -0.45
CKI1YLR133W YCF1P39109 1515 aaKnown RBP12.21□□□□□ -0.45
CKI1YLR133W RPO31P04051 1460 aa12.17□□□□□ -0.46
CKI1YLR133W TY2B-LR1P0C2J3 1770 aa12.04□□□□□ -0.48
CKI1YLR133W TY2B-FP0CX63 1770 aa12.04□□□□□ -0.48
CKI1YLR133W TY2B-GR2P0CX64 1770 aa12.04□□□□□ -0.48
CKI1YLR133W TY2B-CP25384 1770 aa12.04□□□□□ -0.48
CKI1YLR133W TY2B-DR2Q03494 1770 aa12.04□□□□□ -0.48
CKI1YLR133W TY1B-DR1Q03855 1755 aa12.04□□□□□ -0.48
CKI1YLR133W TY2B-DR3Q07791 1770 aaKnown RBP12.04□□□□□ -0.48
CKI1YLR133W TY2B-OR1Q12113 1770 aa12.04□□□□□ -0.48
CKI1YLR133W TY2B-DR1Q12472 1770 aa12.04□□□□□ -0.48
CKI1YLR133W TY2B-OR2Q12501 1770 aa12.04□□□□□ -0.48
CKI1YLR133W CHD1P32657 1468 aa12.04□□□□□ -0.48
CKI1YLR133W TOP2P06786 1428 aaKnown RBP12.01□□□□□ -0.49
CKI1YLR133W CDC25P04821 1589 aa12.01□□□□□ -0.49
CKI1YLR133W RQC2Q12532 1038 aaKnown RBP11.98□□□□□ -0.49
CKI1YLR133W POL1P13382 1468 aa11.97□□□□□ -0.49
CKI1YLR133W TY1B-BRQ12193 1756 aa11.96□□□□□ -0.5
CKI1YLR133W TY1B-GR3Q12316 1755 aa11.96□□□□□ -0.5
CKI1YLR133W TY1B-ORQ92393 1755 aa11.96□□□□□ -0.5
CKI1YLR133W RKR1Q04781 1562 aa11.95□□□□□ -0.5
CKI1YLR133W PAN1P32521 1480 aa11.93□□□□□ -0.5
CKI1YLR133W DNF1P32660 1571 aa11.92□□□□□ -0.5
CKI1YLR133W TY2B-BQ12491 1770 aa11.9□□□□□ -0.5
CKI1YLR133W ESC1Q03661 1658 aaKnown RBP11.89□□□□□ -0.51
CKI1YLR133W TY1B-DR3Q99231 1755 aa11.89□□□□□ -0.51
CKI1YLR133W STU1P38198 1513 aa11.88□□□□□ -0.51
CKI1YLR133W MET5P47169 1442 aa11.88□□□□□ -0.51
CKI1YLR133W TY1B-HO13535 1793 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-DR5P0C2I2 1755 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-DR6P0C2I3 1755 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-LR2P0C2I5 1755 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-LR3P0C2I6 1755 aaKnown RBP11.87□□□□□ -0.51
CKI1YLR133W TY1B-PR1P0C2I9 1755 aaKnown RBP11.87□□□□□ -0.51
CKI1YLR133W TY1B-PR2P0C2J0 1756 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-PR3P0C2J1 1755 aaKnown RBP11.87□□□□□ -0.51
CKI1YLR133W TY1B-JR1P47098 1755 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-ML2Q03434 1755 aaKnown RBP11.87□□□□□ -0.51
CKI1YLR133W TY1B-ER1Q03612 1755 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-ML1Q04711 1755 aaKnown RBP11.87□□□□□ -0.51
CKI1YLR133W TY1B-GR2Q12269 1755 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-OLQ12273 1755 aa11.87□□□□□ -0.51
CKI1YLR133W TY1B-PLQ12414 1755 aaKnown RBP11.87□□□□□ -0.51
CKI1YLR133W YOR1P53049 1477 aa11.86□□□□□ -0.51
CKI1YLR133W MMS22Q06164 1454 aa11.86□□□□□ -0.51
CKI1YLR133W SMC4Q12267 1418 aa11.85□□□□□ -0.51
CKI1YLR133W RPA190P10964 1664 aaKnown RBP11.81□□□□□ -0.52
CKI1YLR133W SPP41P38904 1435 aa11.75□□□□□ -0.53
CKI1YLR133W TRM732Q03496 1420 aa11.75□□□□□ -0.53
CKI1YLR133W LTE1P07866 1435 aa11.69□□□□□ -0.54
CKI1YLR133W YTA7P40340 1379 aa11.69□□□□□ -0.54
CKI1YLR133W TSC11P40061 1430 aa11.68□□□□□ -0.54
CKI1YLR133W TY1B-JR2P47100 1755 aaKnown RBP11.64□□□□□ -0.55
CKI1YLR133W TY1B-ER2Q03619 1755 aa11.64□□□□□ -0.55
CKI1YLR133W TY1B-MR1Q04214 1755 aa11.64□□□□□ -0.55
CKI1YLR133W TY1B-MR2Q04670 1755 aaKnown RBP11.64□□□□□ -0.55
CKI1YLR133W TY1B-LR1Q12088 1755 aaKnown RBP11.64□□□□□ -0.55
CKI1YLR133W TY1B-NL1Q12112 1755 aa11.64□□□□□ -0.55
CKI1YLR133W TY1B-GR1Q12141 1755 aa11.64□□□□□ -0.55
CKI1YLR133W TY1B-BLQ12490 1755 aa11.64□□□□□ -0.55
CKI1YLR133W VTH1P40438 1549 aa11.64□□□□□ -0.55
CKI1YLR133W VTH2P40890 1549 aa11.64□□□□□ -0.55
CKI1YLR133W MYO4P32492 1471 aa11.62□□□□□ -0.55
CKI1YLR133W NUP159P40477 1460 aa11.62□□□□□ -0.55
CKI1YLR133W YRF1-1P0CX20 1796 aa11.58□□□□□ -0.56
CKI1YLR133W YRF1-5P0CX21 1796 aa11.58□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms