RNA–Protein interactions for RNA: YDR143C

SAN1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene SAN1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAN1YDR143C SGS1P35187 1447 aa15.16■□□□□ 0.02
SAN1YDR143C INO80P53115 1489 aa14.84□□□□□ -0.03
SAN1YDR143C TCB3Q03640 1545 aaKnown RBP14.73□□□□□ -0.05
SAN1YDR143C MON2P48563 1636 aaPredicted RBP14.66□□□□□ -0.06
SAN1YDR143C TY1B-DR4Q07793 1604 aa14.59□□□□□ -0.07
SAN1YDR143C SSN2P38931 1420 aa14.41□□□□□ -0.1
SAN1YDR143C SWR1Q05471 1514 aa14.36□□□□□ -0.11
SAN1YDR143C SPA2P23201 1466 aaKnown RBP14.35□□□□□ -0.11
SAN1YDR143C HSL1P34244 1518 aa14.3□□□□□ -0.12
SAN1YDR143C SPT6P23615 1451 aaKnown RBP14.26□□□□□ -0.13
SAN1YDR143C HIR3P47171 1648 aa14.04□□□□□ -0.16
SAN1YDR143C DNA2P38859 1522 aa14.01□□□□□ -0.17
SAN1YDR143C DRS1P32892 752 aaKnown RBP13.97□□□□□ -0.17
SAN1YDR143C XRN1P22147 1528 aaKnown RBP13.94□□□□□ -0.18
SAN1YDR143C KOG1P38873 1557 aa13.88□□□□□ -0.19
SAN1YDR143C REV3P14284 1504 aa13.73□□□□□ -0.21
SAN1YDR143C TAF2P23255 1407 aa13.61□□□□□ -0.23
SAN1YDR143C ECM5Q03214 1411 aa13.6□□□□□ -0.23
SAN1YDR143C BUD4P47136 1447 aa13.59□□□□□ -0.23
SAN1YDR143C THO2P53552 1597 aaKnown RBP13.58□□□□□ -0.23
SAN1YDR143C SIN3P22579 1536 aa13.58□□□□□ -0.24
SAN1YDR143C SSK2P53599 1579 aa13.52□□□□□ -0.24
SAN1YDR143C ATG2P53855 1592 aa13.44□□□□□ -0.26
SAN1YDR143C ESP1Q03018 1630 aa13.41□□□□□ -0.26
SAN1YDR143C SKI3P17883 1432 aaKnown RBP13.4□□□□□ -0.27
SAN1YDR143C MDS3P53094 1487 aa13.38□□□□□ -0.27
SAN1YDR143C PEP1P32319 1579 aa13.35□□□□□ -0.27
SAN1YDR143C MYO2P19524 1574 aaKnown RBP13.32□□□□□ -0.28
SAN1YDR143C YPK9Q12697 1472 aa13.21□□□□□ -0.3
SAN1YDR143C SCC2Q04002 1493 aa13.13□□□□□ -0.31
SAN1YDR143C POL1P13382 1468 aa13.1□□□□□ -0.31
SAN1YDR143C STU1P38198 1513 aa13.08□□□□□ -0.32
SAN1YDR143C UFD4P33202 1483 aa13.06□□□□□ -0.32
SAN1YDR143C RPO31P04051 1460 aa13.04□□□□□ -0.32
SAN1YDR143C RSE1Q04693 1361 aaKnown RBP13.01□□□□□ -0.33
SAN1YDR143C RKR1Q04781 1562 aa13.01□□□□□ -0.33
SAN1YDR143C BPT1P14772 1559 aa12.96□□□□□ -0.33
SAN1YDR143C YCF1P39109 1515 aaKnown RBP12.94□□□□□ -0.34
SAN1YDR143C YOR1P53049 1477 aa12.94□□□□□ -0.34
SAN1YDR143C TOP2P06786 1428 aaKnown RBP12.93□□□□□ -0.34
SAN1YDR143C TY2B-LR1P0C2J3 1770 aa12.91□□□□□ -0.34
SAN1YDR143C TY2B-FP0CX63 1770 aa12.91□□□□□ -0.34
SAN1YDR143C TY2B-GR2P0CX64 1770 aa12.91□□□□□ -0.34
SAN1YDR143C TY2B-CP25384 1770 aa12.91□□□□□ -0.34
SAN1YDR143C TY2B-DR2Q03494 1770 aa12.91□□□□□ -0.34
SAN1YDR143C TY1B-DR1Q03855 1755 aa12.91□□□□□ -0.34
SAN1YDR143C TY2B-DR3Q07791 1770 aaKnown RBP12.91□□□□□ -0.34
SAN1YDR143C TY2B-OR1Q12113 1770 aa12.91□□□□□ -0.34
SAN1YDR143C TY2B-DR1Q12472 1770 aa12.91□□□□□ -0.34
SAN1YDR143C TY2B-OR2Q12501 1770 aa12.91□□□□□ -0.34
SAN1YDR143C YTA7P40340 1379 aa12.88□□□□□ -0.35
SAN1YDR143C SMC4Q12267 1418 aa12.85□□□□□ -0.35
SAN1YDR143C MMS22Q06164 1454 aa12.85□□□□□ -0.35
SAN1YDR143C CHD1P32657 1468 aa12.83□□□□□ -0.36
SAN1YDR143C TY1B-DR3Q99231 1755 aa12.83□□□□□ -0.36
SAN1YDR143C RQC2Q12532 1038 aaKnown RBP12.81□□□□□ -0.36
SAN1YDR143C MTC1P47018 478 aaKnown RBP12.79□□□□□ -0.36
SAN1YDR143C TY2B-BQ12491 1770 aa12.79□□□□□ -0.36
SAN1YDR143C MYO4P32492 1471 aa12.77□□□□□ -0.37
SAN1YDR143C SAS10Q12136 610 aaPredicted RBP12.76□□□□□ -0.37
SAN1YDR143C TY1B-BRQ12193 1756 aa12.74□□□□□ -0.37
SAN1YDR143C TY1B-GR3Q12316 1755 aa12.74□□□□□ -0.37
SAN1YDR143C TY1B-ORQ92393 1755 aa12.74□□□□□ -0.37
SAN1YDR143C CDC25P04821 1589 aa12.71□□□□□ -0.37
SAN1YDR143C TY1B-HO13535 1793 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-DR5P0C2I2 1755 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-DR6P0C2I3 1755 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-LR2P0C2I5 1755 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-LR3P0C2I6 1755 aaKnown RBP12.7□□□□□ -0.38
SAN1YDR143C TY1B-PR1P0C2I9 1755 aaKnown RBP12.7□□□□□ -0.38
SAN1YDR143C TY1B-PR2P0C2J0 1756 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-PR3P0C2J1 1755 aaKnown RBP12.7□□□□□ -0.38
SAN1YDR143C TY1B-JR1P47098 1755 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-ML2Q03434 1755 aaKnown RBP12.7□□□□□ -0.38
SAN1YDR143C TY1B-ER1Q03612 1755 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-ML1Q04711 1755 aaKnown RBP12.7□□□□□ -0.38
SAN1YDR143C TY1B-GR2Q12269 1755 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-OLQ12273 1755 aa12.7□□□□□ -0.38
SAN1YDR143C TY1B-PLQ12414 1755 aaKnown RBP12.7□□□□□ -0.38
SAN1YDR143C SPP41P38904 1435 aa12.67□□□□□ -0.38
SAN1YDR143C PAN1P32521 1480 aa12.63□□□□□ -0.39
SAN1YDR143C SNQ2P32568 1501 aaKnown RBP12.62□□□□□ -0.39
SAN1YDR143C STH1P32597 1359 aa12.59□□□□□ -0.39
SAN1YDR143C ESC1Q03661 1658 aaKnown RBP12.58□□□□□ -0.4
SAN1YDR143C TSC11P40061 1430 aa12.56□□□□□ -0.4
SAN1YDR143C VTH1P40438 1549 aa12.56□□□□□ -0.4
SAN1YDR143C VTH2P40890 1549 aa12.56□□□□□ -0.4
SAN1YDR143C DNF1P32660 1571 aa12.55□□□□□ -0.4
SAN1YDR143C MLP2P40457 1679 aa12.51□□□□□ -0.41
SAN1YDR143C TAF7Q05021 590 aa12.51□□□□□ -0.41
SAN1YDR143C TRM732Q03496 1420 aa12.5□□□□□ -0.41
SAN1YDR143C PDR15Q04182 1529 aaKnown RBP12.49□□□□□ -0.41
SAN1YDR143C RPA190P10964 1664 aaKnown RBP12.49□□□□□ -0.41
SAN1YDR143C TY1B-JR2P47100 1755 aaKnown RBP12.49□□□□□ -0.41
SAN1YDR143C TY1B-ER2Q03619 1755 aa12.49□□□□□ -0.41
SAN1YDR143C TY1B-MR1Q04214 1755 aa12.49□□□□□ -0.41
SAN1YDR143C TY1B-MR2Q04670 1755 aaKnown RBP12.49□□□□□ -0.41
SAN1YDR143C TY1B-LR1Q12088 1755 aaKnown RBP12.49□□□□□ -0.41
SAN1YDR143C TY1B-NL1Q12112 1755 aa12.49□□□□□ -0.41
SAN1YDR143C TY1B-GR1Q12141 1755 aa12.49□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms