RNA–Protein interactions for RNA: YIL109C

SEC24, Transcript of Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, yeastyeast

Gene SEC24, Length 2,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC24YIL109C SGS1P35187 1447 aa11.54□□□□□ -0.56
SEC24YIL109C SPA2P23201 1466 aaKnown RBP11.39□□□□□ -0.59
SEC24YIL109C DRS1P32892 752 aaKnown RBP11.34□□□□□ -0.59
SEC24YIL109C SSN2P38931 1420 aa11.3□□□□□ -0.6
SEC24YIL109C INO80P53115 1489 aa11.01□□□□□ -0.65
SEC24YIL109C MON2P48563 1636 aaPredicted RBP10.75□□□□□ -0.69
SEC24YIL109C SKI3P17883 1432 aaKnown RBP10.69□□□□□ -0.7
SEC24YIL109C TCB3Q03640 1545 aaKnown RBP10.67□□□□□ -0.7
SEC24YIL109C MTC1P47018 478 aaKnown RBP10.54□□□□□ -0.72
SEC24YIL109C TY1B-DR4Q07793 1604 aa10.49□□□□□ -0.73
SEC24YIL109C HSL1P34244 1518 aa10.48□□□□□ -0.73
SEC24YIL109C SPT6P23615 1451 aaKnown RBP10.44□□□□□ -0.74
SEC24YIL109C MMS22Q06164 1454 aa10.41□□□□□ -0.74
SEC24YIL109C XRN1P22147 1528 aaKnown RBP10.39□□□□□ -0.75
SEC24YIL109C NOP2P40991 618 aaKnown RBP10.38□□□□□ -0.75
SEC24YIL109C NSR1P27476 414 aaKnown RBP RIP-Chip data10.37□□□□□ -0.75not detected
SEC24YIL109C CHD1P32657 1468 aa10.34□□□□□ -0.75
SEC24YIL109C RSE1Q04693 1361 aaKnown RBP10.34□□□□□ -0.75
SEC24YIL109C HIR3P47171 1648 aa10.34□□□□□ -0.75
SEC24YIL109C REV3P14284 1504 aa10.25□□□□□ -0.77
SEC24YIL109C TAF2P23255 1407 aa10.25□□□□□ -0.77
SEC24YIL109C TFA1P36100 482 aa10.21□□□□□ -0.78
SEC24YIL109C SWR1Q05471 1514 aa10.2□□□□□ -0.78
SEC24YIL109C SAS10Q12136 610 aaPredicted RBP10.2□□□□□ -0.78
SEC24YIL109C THO2P53552 1597 aaKnown RBP10.19□□□□□ -0.78
SEC24YIL109C UFD4P33202 1483 aa10.16□□□□□ -0.78
SEC24YIL109C SSK2P53599 1579 aa10.15□□□□□ -0.78
SEC24YIL109C BFR2Q06631 534 aaKnown RBP10.14□□□□□ -0.79
SEC24YIL109C SIN3P22579 1536 aa10.14□□□□□ -0.79
SEC24YIL109C TRM732Q03496 1420 aa10.11□□□□□ -0.79
SEC24YIL109C STU1P38198 1513 aa10.09□□□□□ -0.79
SEC24YIL109C KOG1P38873 1557 aa10.08□□□□□ -0.8
SEC24YIL109C MYO2P19524 1574 aaKnown RBP10.05□□□□□ -0.8
SEC24YIL109C BPT1P14772 1559 aa10.04□□□□□ -0.8
SEC24YIL109C ESP1Q03018 1630 aa10.04□□□□□ -0.8
SEC24YIL109C IKI3Q06706 1349 aaKnown RBP10.04□□□□□ -0.8
SEC24YIL109C YTA7P40340 1379 aa10.03□□□□□ -0.8
SEC24YIL109C POL1P13382 1468 aa10.03□□□□□ -0.8
SEC24YIL109C DNA2P38859 1522 aa10.03□□□□□ -0.8
SEC24YIL109C SCC2Q04002 1493 aa9.97□□□□□ -0.81
SEC24YIL109C SPP41P38904 1435 aa9.95□□□□□ -0.82
SEC24YIL109C SSM4P40318 1319 aa9.95□□□□□ -0.82
SEC24YIL109C ENP1P38333 483 aaKnown RBP9.9□□□□□ -0.82
SEC24YIL109C POL5P39985 1022 aaKnown RBP9.87□□□□□ -0.83
SEC24YIL109C ECM5Q03214 1411 aa9.86□□□□□ -0.83
SEC24YIL109C YPK9Q12697 1472 aa9.85□□□□□ -0.83
SEC24YIL109C BUD4P47136 1447 aa9.84□□□□□ -0.83
SEC24YIL109C RKR1Q04781 1562 aa9.84□□□□□ -0.83
SEC24YIL109C YOR1P53049 1477 aa9.83□□□□□ -0.84
SEC24YIL109C MYO4P32492 1471 aa9.82□□□□□ -0.84
SEC24YIL109C NUP170P38181 1502 aa9.81□□□□□ -0.84
SEC24YIL109C STH1P32597 1359 aa9.81□□□□□ -0.84
SEC24YIL109C SPT7P35177 1332 aa9.81□□□□□ -0.84
SEC24YIL109C IFH1P39520 1085 aa9.8□□□□□ -0.84
SEC24YIL109C RTT106P40161 455 aa9.8□□□□□ -0.84
SEC24YIL109C TAF7Q05021 590 aa9.8□□□□□ -0.84
SEC24YIL109C ATG2P53855 1592 aa9.79□□□□□ -0.84
SEC24YIL109C SNQ2P32568 1501 aaKnown RBP9.78□□□□□ -0.84
SEC24YIL109C PAN1P32521 1480 aa9.72□□□□□ -0.85
SEC24YIL109C SMC4Q12267 1418 aa9.71□□□□□ -0.86
SEC24YIL109C GEA1P47102 1408 aaPredicted RBP9.7□□□□□ -0.86
SEC24YIL109C TSC11P40061 1430 aa9.69□□□□□ -0.86
SEC24YIL109C PDR15Q04182 1529 aaKnown RBP9.68□□□□□ -0.86
SEC24YIL109C TOP2P06786 1428 aaKnown RBP9.67□□□□□ -0.86
SEC24YIL109C MLP2P40457 1679 aa9.67□□□□□ -0.86
SEC24YIL109C SEC3P33332 1336 aaKnown RBP9.67□□□□□ -0.86
SEC24YIL109C RPO31P04051 1460 aa9.67□□□□□ -0.86
SEC24YIL109C YCF1P39109 1515 aaKnown RBP9.66□□□□□ -0.86
SEC24YIL109C PRS1P32895 427 aaKnown RBP9.64□□□□□ -0.87
SEC24YIL109C PEP1P32319 1579 aa9.64□□□□□ -0.87
SEC24YIL109C LEU3P08638 886 aa9.63□□□□□ -0.87
SEC24YIL109C PDR10P51533 1564 aa9.63□□□□□ -0.87
SEC24YIL109C AVT3P36062 692 aa9.6□□□□□ -0.87
SEC24YIL109C TY1B-DR3Q99231 1755 aa9.58□□□□□ -0.88
SEC24YIL109C ULS1Q08562 1619 aa9.57□□□□□ -0.88
SEC24YIL109C TY2B-LR1P0C2J3 1770 aa9.55□□□□□ -0.88
SEC24YIL109C TY2B-FP0CX63 1770 aa9.55□□□□□ -0.88
SEC24YIL109C TY2B-GR2P0CX64 1770 aa9.55□□□□□ -0.88
SEC24YIL109C TY2B-CP25384 1770 aa9.55□□□□□ -0.88
SEC24YIL109C TY2B-DR2Q03494 1770 aa9.55□□□□□ -0.88
SEC24YIL109C TY1B-DR1Q03855 1755 aa9.55□□□□□ -0.88
SEC24YIL109C TY2B-DR3Q07791 1770 aaKnown RBP9.55□□□□□ -0.88
SEC24YIL109C TY2B-OR1Q12113 1770 aa9.55□□□□□ -0.88
SEC24YIL109C TY2B-DR1Q12472 1770 aa9.55□□□□□ -0.88
SEC24YIL109C TY2B-OR2Q12501 1770 aa9.55□□□□□ -0.88
SEC24YIL109C TY3B-GQ99315 1547 aa9.55□□□□□ -0.88
SEC24YIL109C VPS15P22219 1454 aa9.53□□□□□ -0.88
SEC24YIL109C YPR148CQ06523 435 aa9.52□□□□□ -0.89
SEC24YIL109C MDS3P53094 1487 aa9.51□□□□□ -0.89
SEC24YIL109C PSD2P53037 1138 aaKnown RBP9.51□□□□□ -0.89
SEC24YIL109C TY2B-BQ12491 1770 aa9.49□□□□□ -0.89
SEC24YIL109C CAB3P36076 571 aa9.47□□□□□ -0.89
SEC24YIL109C RQC2Q12532 1038 aaKnown RBP9.46□□□□□ -0.89
SEC24YIL109C ORC1P54784 914 aaPredicted RBP9.46□□□□□ -0.9
SEC24YIL109C DNF1P32660 1571 aa9.46□□□□□ -0.9
SEC24YIL109C CFT1Q06632 1357 aaKnown RBP9.45□□□□□ -0.9
SEC24YIL109C SRB8P25648 1427 aa9.43□□□□□ -0.9
SEC24YIL109C EBP2P36049 427 aaKnown RBP9.43□□□□□ -0.9
SEC24YIL109C DIP2Q12220 943 aaPredicted RBP9.41□□□□□ -0.9
SEC24YIL109C NUP159P40477 1460 aa9.4□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms