RNA–Protein interactions for RNA: YNR011C

PRP2, Transcript of RNA-dependent DExD/H-box ATPase, yeastyeast

Gene PRP2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP2YNR011C RQC2Q12532 1038 aaKnown RBP11.53□□□□□ -0.56
PRP2YNR011C BFR2Q06631 534 aaKnown RBP10.94□□□□□ -0.66
PRP2YNR011C TAF7Q05021 590 aa10.71□□□□□ -0.69
PRP2YNR011C URN1Q06525 465 aaKnown RBP10.24□□□□□ -0.77
PRP2YNR011C TFA1P36100 482 aa10.16□□□□□ -0.78
PRP2YNR011C DRS1P32892 752 aaKnown RBP10.08□□□□□ -0.8
PRP2YNR011C SIS2P36024 562 aa9.7□□□□□ -0.86
PRP2YNR011C EBP2P36049 427 aaKnown RBP9.64□□□□□ -0.87
PRP2YNR011C MON2P48563 1636 aaPredicted RBP9.59□□□□□ -0.87
PRP2YNR011C CAB3P36076 571 aa9.54□□□□□ -0.88
PRP2YNR011C YRB30P53107 440 aaPredicted RBP9.47□□□□□ -0.89
PRP2YNR011C YFR016CP43597 1233 aaKnown RBP9.44□□□□□ -0.9
PRP2YNR011C NAP1P25293 417 aaKnown RBP9.39□□□□□ -0.91
PRP2YNR011C INO80P53115 1489 aa9.38□□□□□ -0.91
PRP2YNR011C NOP2P40991 618 aaKnown RBP9.36□□□□□ -0.91
PRP2YNR011C RPS0BP46654 252 aaKnown RBP9.31□□□□□ -0.92
PRP2YNR011C IOC4Q04213 475 aa9.31□□□□□ -0.92
PRP2YNR011C TCB3Q03640 1545 aaKnown RBP9.3□□□□□ -0.92
PRP2YNR011C LEO1P38439 464 aa9.26□□□□□ -0.93
PRP2YNR011C DIP2Q12220 943 aaPredicted RBP9.26□□□□□ -0.93
PRP2YNR011C AVT3P36062 692 aa9.23□□□□□ -0.93
PRP2YNR011C AIM44Q99299 758 aa9.23□□□□□ -0.93
PRP2YNR011C KRI1P42846 591 aaKnown RBP9.21□□□□□ -0.93
PRP2YNR011C TY1B-DR4Q07793 1604 aa9.15□□□□□ -0.94
PRP2YNR011C DMA1P38823 416 aa9.1□□□□□ -0.95
PRP2YNR011C SWR1Q05471 1514 aa9.09□□□□□ -0.95
PRP2YNR011C MNN4P36044 1178 aa9.08□□□□□ -0.96
PRP2YNR011C KOG1P38873 1557 aa9.05□□□□□ -0.96
PRP2YNR011C SGS1P35187 1447 aa9.01□□□□□ -0.97
PRP2YNR011C DNA2P38859 1522 aa8.94□□□□□ -0.98
PRP2YNR011C SNU71P53207 620 aaKnown RBP8.94□□□□□ -0.98
PRP2YNR011C TOP1P04786 769 aa8.91□□□□□ -0.98
PRP2YNR011C CWC22P53333 577 aaKnown RBP8.91□□□□□ -0.98
PRP2YNR011C MTC1P47018 478 aaKnown RBP8.9□□□□□ -0.98
PRP2YNR011C IFH1P39520 1085 aa8.88□□□□□ -0.99
PRP2YNR011C DEF1P35732 738 aaKnown RBP8.83□□□□□ -1
PRP2YNR011C YPR148CQ06523 435 aa8.82□□□□□ -1
PRP2YNR011C HSL1P34244 1518 aa8.78□□□□□ -1
PRP2YNR011C ORC1P54784 914 aaPredicted RBP8.77□□□□□ -1.01
PRP2YNR011C MDG1P53885 366 aa8.76□□□□□ -1.01
PRP2YNR011C SPT6P23615 1451 aaKnown RBP8.76□□□□□ -1.01
PRP2YNR011C PSH1Q12161 406 aa8.73□□□□□ -1.01
PRP2YNR011C THO2P53552 1597 aaKnown RBP8.69□□□□□ -1.02
PRP2YNR011C RLP24Q07915 199 aaKnown RBP8.68□□□□□ -1.02
PRP2YNR011C NSR1P27476 414 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02not detected
PRP2YNR011C SPA2P23201 1466 aaKnown RBP8.66□□□□□ -1.02
PRP2YNR011C ENV11P53246 860 aa8.66□□□□□ -1.02
PRP2YNR011C NUG1P40010 520 aaKnown RBP8.65□□□□□ -1.02
PRP2YNR011C RLF2Q12495 606 aa8.62□□□□□ -1.03
PRP2YNR011C TCB2P48231 1178 aa8.61□□□□□ -1.03
PRP2YNR011C PLP2Q12017 286 aa8.61□□□□□ -1.03
PRP2YNR011C NOP53Q12080 455 aaKnown RBP8.61□□□□□ -1.03
PRP2YNR011C HIF1Q12373 385 aa8.6□□□□□ -1.03
PRP2YNR011C HSP82P02829 709 aaKnown RBP8.59□□□□□ -1.03
PRP2YNR011C FPR3P38911 411 aaKnown RBP8.59□□□□□ -1.03
PRP2YNR011C GIN4Q12263 1142 aa8.58□□□□□ -1.04
PRP2YNR011C HIR3P47171 1648 aa8.58□□□□□ -1.04
PRP2YNR011C BRL1P38770 471 aa8.57□□□□□ -1.04
PRP2YNR011C RSE1Q04693 1361 aaKnown RBP8.55□□□□□ -1.04
PRP2YNR011C SPT2P06843 333 aaPredicted RBP8.54□□□□□ -1.04
PRP2YNR011C TOA1P32773 286 aa8.53□□□□□ -1.04
PRP2YNR011C RPS0AP32905 252 aaKnown RBP8.53□□□□□ -1.04
PRP2YNR011C BUD4P47136 1447 aa8.53□□□□□ -1.04
PRP2YNR011C RPN1P38764 993 aaKnown RBP8.52□□□□□ -1.04
PRP2YNR011C SPT7P35177 1332 aa8.52□□□□□ -1.05
PRP2YNR011C SWE1P32944 819 aa8.51□□□□□ -1.05
PRP2YNR011C ENP1P38333 483 aaKnown RBP8.5□□□□□ -1.05
PRP2YNR011C SUB1P54000 292 aaKnown RBP8.49□□□□□ -1.05
PRP2YNR011C TIF4632P39936 914 aaKnown RBP8.49□□□□□ -1.05
PRP2YNR011C VPS72Q03388 795 aa8.48□□□□□ -1.05
PRP2YNR011C SAS10Q12136 610 aaPredicted RBP8.48□□□□□ -1.05
PRP2YNR011C NHA1Q99271 985 aa8.46□□□□□ -1.06
PRP2YNR011C QCR6P00127 147 aa8.45□□□□□ -1.06
PRP2YNR011C TLG1Q03322 224 aa8.45□□□□□ -1.06
PRP2YNR011C DMA2P53924 522 aa8.44□□□□□ -1.06
PRP2YNR011C LEU3P08638 886 aa8.43□□□□□ -1.06
PRP2YNR011C SPT16P32558 1035 aaKnown RBP8.43□□□□□ -1.06
PRP2YNR011C RIX1P38883 763 aaPredicted RBP8.42□□□□□ -1.06
PRP2YNR011C SIN3P22579 1536 aa8.41□□□□□ -1.06
PRP2YNR011C ECM5Q03214 1411 aa8.41□□□□□ -1.06
PRP2YNR011C MDS3P53094 1487 aa8.4□□□□□ -1.06
PRP2YNR011C ASF1P32447 279 aa8.4□□□□□ -1.07
PRP2YNR011C SSA1P10591 642 aaKnown RBP8.39□□□□□ -1.07
PRP2YNR011C SSA2P10592 639 aaKnown RBP8.39□□□□□ -1.07
PRP2YNR011C MPP10P47083 593 aaKnown RBP8.38□□□□□ -1.07
PRP2YNR011C YGR130CP53278 816 aa8.38□□□□□ -1.07
PRP2YNR011C ABP1P15891 592 aaKnown RBP8.37□□□□□ -1.07
PRP2YNR011C BRN1P38170 754 aa8.37□□□□□ -1.07
PRP2YNR011C FUN12P39730 1002 aaKnown RBP8.37□□□□□ -1.07
PRP2YNR011C FPR4Q06205 392 aaPredicted RBP8.37□□□□□ -1.07
PRP2YNR011C SSK2P53599 1579 aa8.36□□□□□ -1.07
PRP2YNR011C SSN2P38931 1420 aa8.36□□□□□ -1.07
PRP2YNR011C PEP1P32319 1579 aa8.36□□□□□ -1.07
PRP2YNR011C YTA7P40340 1379 aa8.35□□□□□ -1.07
PRP2YNR011C RNA1P11745 407 aaKnown RBP8.35□□□□□ -1.07
PRP2YNR011C PIL1P53252 339 aaKnown RBP8.35□□□□□ -1.07
PRP2YNR011C XRN1P22147 1528 aaKnown RBP8.35□□□□□ -1.07
PRP2YNR011C YNL011CP53980 444 aa8.33□□□□□ -1.08
PRP2YNR011C TPO2P53283 614 aa8.33□□□□□ -1.08
PRP2YNR011C REV3P14284 1504 aa8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms