RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeastyeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRB1YEL060C SGS1P35187 1447 aa11.53□□□□□ -0.56
PRB1YEL060C SPA2P23201 1466 aaKnown RBP11.46□□□□□ -0.57
PRB1YEL060C SSN2P38931 1420 aa11.3□□□□□ -0.6
PRB1YEL060C INO80P53115 1489 aa11.09□□□□□ -0.63
PRB1YEL060C DRS1P32892 752 aaKnown RBP10.99□□□□□ -0.65
PRB1YEL060C RQC2Q12532 1038 aaKnown RBP10.99□□□□□ -0.65
PRB1YEL060C SKI3P17883 1432 aaKnown RBP10.81□□□□□ -0.68
PRB1YEL060C TCB3Q03640 1545 aaKnown RBP10.7□□□□□ -0.7
PRB1YEL060C TY1B-DR4Q07793 1604 aa10.48□□□□□ -0.73
PRB1YEL060C CHD1P32657 1468 aa10.45□□□□□ -0.74
PRB1YEL060C HSL1P34244 1518 aa10.45□□□□□ -0.74
PRB1YEL060C TAF7Q05021 590 aa10.44□□□□□ -0.74
PRB1YEL060C MMS22Q06164 1454 aa10.44□□□□□ -0.74
PRB1YEL060C NOP2P40991 618 aaKnown RBP10.4□□□□□ -0.74
PRB1YEL060C SPT6P23615 1451 aaKnown RBP10.4□□□□□ -0.75
PRB1YEL060C BFR2Q06631 534 aaKnown RBP10.39□□□□□ -0.75
PRB1YEL060C XRN1P22147 1528 aaKnown RBP10.34□□□□□ -0.75
PRB1YEL060C NSR1P27476 414 aaKnown RBP RIP-Chip data10.33□□□□□ -0.76not detected
PRB1YEL060C HIR3P47171 1648 aa10.29□□□□□ -0.76
PRB1YEL060C REV3P14284 1504 aa10.22□□□□□ -0.77
PRB1YEL060C TFA1P36100 482 aa10.22□□□□□ -0.77
PRB1YEL060C THO2P53552 1597 aaKnown RBP10.21□□□□□ -0.77
PRB1YEL060C UFD4P33202 1483 aa10.2□□□□□ -0.78
PRB1YEL060C SIN3P22579 1536 aa10.18□□□□□ -0.78
PRB1YEL060C RSE1Q04693 1361 aaKnown RBP10.16□□□□□ -0.78
PRB1YEL060C SSK2P53599 1579 aa10.15□□□□□ -0.78
PRB1YEL060C TAF2P23255 1407 aa10.12□□□□□ -0.79
PRB1YEL060C STU1P38198 1513 aa10.11□□□□□ -0.79
PRB1YEL060C TRM732Q03496 1420 aa10.1□□□□□ -0.79
PRB1YEL060C SAS10Q12136 610 aaPredicted RBP10.09□□□□□ -0.79
PRB1YEL060C YTA7P40340 1379 aa10.08□□□□□ -0.8
PRB1YEL060C IKI3Q06706 1349 aaKnown RBP10.08□□□□□ -0.8
PRB1YEL060C POL1P13382 1468 aa10.05□□□□□ -0.8
PRB1YEL060C MYO2P19524 1574 aaKnown RBP10.05□□□□□ -0.8
PRB1YEL060C ESP1Q03018 1630 aa10.02□□□□□ -0.8
PRB1YEL060C SPP41P38904 1435 aa10.02□□□□□ -0.81
PRB1YEL060C SWR1Q05471 1514 aa9.98□□□□□ -0.81
PRB1YEL060C BPT1P14772 1559 aa9.97□□□□□ -0.81
PRB1YEL060C ENP1P38333 483 aaKnown RBP9.95□□□□□ -0.82
PRB1YEL060C SCC2Q04002 1493 aa9.93□□□□□ -0.82
PRB1YEL060C MON2P48563 1636 aaPredicted RBP9.92□□□□□ -0.82
PRB1YEL060C SSM4P40318 1319 aa9.9□□□□□ -0.82
PRB1YEL060C ECM5Q03214 1411 aa9.9□□□□□ -0.82
PRB1YEL060C NUP170P38181 1502 aa9.88□□□□□ -0.83
PRB1YEL060C POL5P39985 1022 aaKnown RBP9.88□□□□□ -0.83
PRB1YEL060C MYO4P32492 1471 aa9.88□□□□□ -0.83
PRB1YEL060C YPK9Q12697 1472 aa9.87□□□□□ -0.83
PRB1YEL060C DNA2P38859 1522 aa9.86□□□□□ -0.83
PRB1YEL060C YOR1P53049 1477 aa9.85□□□□□ -0.83
PRB1YEL060C BUD4P47136 1447 aa9.84□□□□□ -0.83
PRB1YEL060C RKR1Q04781 1562 aa9.82□□□□□ -0.84
PRB1YEL060C STH1P32597 1359 aa9.79□□□□□ -0.84
PRB1YEL060C SMC4Q12267 1418 aa9.78□□□□□ -0.84
PRB1YEL060C SNQ2P32568 1501 aaKnown RBP9.78□□□□□ -0.84
PRB1YEL060C ATG2P53855 1592 aa9.76□□□□□ -0.85
PRB1YEL060C SEC3P33332 1336 aaKnown RBP9.76□□□□□ -0.85
PRB1YEL060C SPT7P35177 1332 aa9.76□□□□□ -0.85
PRB1YEL060C PAN1P32521 1480 aa9.74□□□□□ -0.85
PRB1YEL060C RTT106P40161 455 aa9.72□□□□□ -0.85
PRB1YEL060C GEA1P47102 1408 aaPredicted RBP9.7□□□□□ -0.86
PRB1YEL060C IFH1P39520 1085 aa9.69□□□□□ -0.86
PRB1YEL060C TOP2P06786 1428 aaKnown RBP9.69□□□□□ -0.86
PRB1YEL060C TSC11P40061 1430 aa9.68□□□□□ -0.86
PRB1YEL060C RPO31P04051 1460 aa9.68□□□□□ -0.86
PRB1YEL060C PDR15Q04182 1529 aaKnown RBP9.65□□□□□ -0.86
PRB1YEL060C MLP2P40457 1679 aa9.65□□□□□ -0.86
PRB1YEL060C PRS1P32895 427 aaKnown RBP9.64□□□□□ -0.87
PRB1YEL060C YCF1P39109 1515 aaKnown RBP9.63□□□□□ -0.87
PRB1YEL060C URN1Q06525 465 aaKnown RBP9.62□□□□□ -0.87
PRB1YEL060C PEP1P32319 1579 aa9.61□□□□□ -0.87
PRB1YEL060C PDR10P51533 1564 aa9.61□□□□□ -0.87
PRB1YEL060C KOG1P38873 1557 aa9.6□□□□□ -0.87
PRB1YEL060C ULS1Q08562 1619 aa9.55□□□□□ -0.88
PRB1YEL060C CAB3P36076 571 aa9.55□□□□□ -0.88
PRB1YEL060C TY1B-DR3Q99231 1755 aa9.53□□□□□ -0.88
PRB1YEL060C TY3B-GQ99315 1547 aa9.52□□□□□ -0.89
PRB1YEL060C TY2B-LR1P0C2J3 1770 aa9.51□□□□□ -0.89
PRB1YEL060C TY2B-FP0CX63 1770 aa9.51□□□□□ -0.89
PRB1YEL060C TY2B-GR2P0CX64 1770 aa9.51□□□□□ -0.89
PRB1YEL060C TY2B-CP25384 1770 aa9.51□□□□□ -0.89
PRB1YEL060C TY2B-DR2Q03494 1770 aa9.51□□□□□ -0.89
PRB1YEL060C TY1B-DR1Q03855 1755 aa9.51□□□□□ -0.89
PRB1YEL060C TY2B-DR3Q07791 1770 aaKnown RBP9.51□□□□□ -0.89
PRB1YEL060C TY2B-OR1Q12113 1770 aa9.51□□□□□ -0.89
PRB1YEL060C TY2B-DR1Q12472 1770 aa9.51□□□□□ -0.89
PRB1YEL060C TY2B-OR2Q12501 1770 aa9.51□□□□□ -0.89
PRB1YEL060C VPS15P22219 1454 aa9.5□□□□□ -0.89
PRB1YEL060C LEU3P08638 886 aa9.49□□□□□ -0.89
PRB1YEL060C EBP2P36049 427 aaKnown RBP9.49□□□□□ -0.89
PRB1YEL060C YPR148CQ06523 435 aa9.48□□□□□ -0.89
PRB1YEL060C SRB8P25648 1427 aa9.48□□□□□ -0.89
PRB1YEL060C MDS3P53094 1487 aa9.47□□□□□ -0.89
PRB1YEL060C NUP159P40477 1460 aa9.45□□□□□ -0.9
PRB1YEL060C YLR419WQ06698 1435 aaKnown RBP9.45□□□□□ -0.9
PRB1YEL060C PSD2P53037 1138 aaKnown RBP9.44□□□□□ -0.9
PRB1YEL060C TY2B-BQ12491 1770 aa9.44□□□□□ -0.9
PRB1YEL060C DNF1P32660 1571 aa9.44□□□□□ -0.9
PRB1YEL060C MHP1P43638 1398 aa9.4□□□□□ -0.9
PRB1YEL060C SNT2P53127 1403 aa9.39□□□□□ -0.91
PRB1YEL060C CFT1Q06632 1357 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms