RNA–Protein interactions for RNA: YBR276C

PPS1, Transcript of Protein phosphatase, yeastyeast

Gene PPS1, Length 2,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPS1YBR276C DRS1P32892 752 aaKnown RBP11.83□□□□□ -0.52
PPS1YBR276C TFA1P36100 482 aa10.97□□□□□ -0.65
PPS1YBR276C MTC1P47018 478 aaKnown RBP10.72□□□□□ -0.69
PPS1YBR276C BFR2Q06631 534 aaKnown RBP10.69□□□□□ -0.7
PPS1YBR276C SPA2P23201 1466 aaKnown RBP10.53□□□□□ -0.72
PPS1YBR276C SGS1P35187 1447 aa10.37□□□□□ -0.75
PPS1YBR276C NOP2P40991 618 aaKnown RBP10.37□□□□□ -0.75
PPS1YBR276C SSN2P38931 1420 aa10.34□□□□□ -0.75
PPS1YBR276C SKI3P17883 1432 aaKnown RBP10.22□□□□□ -0.77
PPS1YBR276C NSR1P27476 414 aaKnown RBP RIP-Chip data10.15□□□□□ -0.79not detected
PPS1YBR276C RQC2Q12532 1038 aaKnown RBP10.13□□□□□ -0.79
PPS1YBR276C AVT3P36062 692 aa10.03□□□□□ -0.8
PPS1YBR276C TAF7Q05021 590 aa9.88□□□□□ -0.83
PPS1YBR276C INO80P53115 1489 aa9.84□□□□□ -0.83
PPS1YBR276C EBP2P36049 427 aaKnown RBP9.78□□□□□ -0.84
PPS1YBR276C CAB3P36076 571 aa9.77□□□□□ -0.85
PPS1YBR276C DIP2Q12220 943 aaPredicted RBP9.72□□□□□ -0.85
PPS1YBR276C MMS22Q06164 1454 aa9.69□□□□□ -0.86
PPS1YBR276C CHD1P32657 1468 aa9.68□□□□□ -0.86
PPS1YBR276C TCB3Q03640 1545 aaKnown RBP9.59□□□□□ -0.87
PPS1YBR276C ENP1P38333 483 aaKnown RBP9.58□□□□□ -0.88
PPS1YBR276C YPR148CQ06523 435 aa9.58□□□□□ -0.88
PPS1YBR276C UFD4P33202 1483 aa9.57□□□□□ -0.88
PPS1YBR276C RSE1Q04693 1361 aaKnown RBP9.55□□□□□ -0.88
PPS1YBR276C XRN1P22147 1528 aaKnown RBP9.5□□□□□ -0.89
PPS1YBR276C DMA1P38823 416 aa9.44□□□□□ -0.9
PPS1YBR276C SPP41P38904 1435 aa9.41□□□□□ -0.9
PPS1YBR276C STH1P32597 1359 aa9.41□□□□□ -0.9
PPS1YBR276C TRM732Q03496 1420 aa9.41□□□□□ -0.9
PPS1YBR276C MON2P48563 1636 aaPredicted RBP9.39□□□□□ -0.91
PPS1YBR276C SIS2P36024 562 aa9.37□□□□□ -0.91
PPS1YBR276C IKI3Q06706 1349 aaKnown RBP9.35□□□□□ -0.91
PPS1YBR276C SPT7P35177 1332 aa9.34□□□□□ -0.91
PPS1YBR276C POL5P39985 1022 aaKnown RBP9.34□□□□□ -0.91
PPS1YBR276C PRS1P32895 427 aaKnown RBP9.29□□□□□ -0.92
PPS1YBR276C ECM5Q03214 1411 aa9.27□□□□□ -0.93
PPS1YBR276C URN1Q06525 465 aaKnown RBP9.27□□□□□ -0.93
PPS1YBR276C SEC3P33332 1336 aaKnown RBP9.26□□□□□ -0.93
PPS1YBR276C HSL1P34244 1518 aa9.25□□□□□ -0.93
PPS1YBR276C SAS10Q12136 610 aaPredicted RBP9.24□□□□□ -0.93
PPS1YBR276C MYO2P19524 1574 aaKnown RBP9.24□□□□□ -0.93
PPS1YBR276C SSM4P40318 1319 aa9.22□□□□□ -0.93
PPS1YBR276C TY1B-DR4Q07793 1604 aa9.22□□□□□ -0.93
PPS1YBR276C STU1P38198 1513 aa9.21□□□□□ -0.93
PPS1YBR276C LEO1P38439 464 aa9.19□□□□□ -0.94
PPS1YBR276C NUP170P38181 1502 aa9.18□□□□□ -0.94
PPS1YBR276C SPT6P23615 1451 aaKnown RBP9.18□□□□□ -0.94
PPS1YBR276C TCB2P48231 1178 aa9.18□□□□□ -0.94
PPS1YBR276C CLC1P17891 233 aa9.16□□□□□ -0.94
PPS1YBR276C IME2P32581 645 aa9.16□□□□□ -0.94
PPS1YBR276C THO2P53552 1597 aaKnown RBP9.16□□□□□ -0.94
PPS1YBR276C REV3P14284 1504 aa9.14□□□□□ -0.95
PPS1YBR276C HIR3P47171 1648 aa9.14□□□□□ -0.95
PPS1YBR276C YTA7P40340 1379 aa9.14□□□□□ -0.95
PPS1YBR276C PDR10P51533 1564 aa9.12□□□□□ -0.95
PPS1YBR276C BPT1P14772 1559 aa9.11□□□□□ -0.95
PPS1YBR276C SSK2P53599 1579 aa9.11□□□□□ -0.95
PPS1YBR276C SIN3P22579 1536 aa9.11□□□□□ -0.95
PPS1YBR276C SCC2Q04002 1493 aa9.11□□□□□ -0.95
PPS1YBR276C RTT106P40161 455 aa9.11□□□□□ -0.95
PPS1YBR276C CFT1Q06632 1357 aaKnown RBP9.09□□□□□ -0.95
PPS1YBR276C PEP1P32319 1579 aa9.09□□□□□ -0.95
PPS1YBR276C POL1P13382 1468 aa9.08□□□□□ -0.96
PPS1YBR276C BUD4P47136 1447 aa9.07□□□□□ -0.96
PPS1YBR276C MNN4P36044 1178 aa9.06□□□□□ -0.96
PPS1YBR276C OPY1P38271 328 aa9.05□□□□□ -0.96
PPS1YBR276C TAF2P23255 1407 aa9.05□□□□□ -0.96
PPS1YBR276C YFR016CP43597 1233 aaKnown RBP9.05□□□□□ -0.96
PPS1YBR276C SRB8P25648 1427 aa9.05□□□□□ -0.96
PPS1YBR276C MLP2P40457 1679 aa9.04□□□□□ -0.96
PPS1YBR276C LEU3P08638 886 aa9.03□□□□□ -0.96
PPS1YBR276C YLR419WQ06698 1435 aaKnown RBP9□□□□□ -0.97
PPS1YBR276C ESP1Q03018 1630 aa8.99□□□□□ -0.97
PPS1YBR276C PAN1P32521 1480 aa8.98□□□□□ -0.97
PPS1YBR276C RPC31P17890 251 aa8.98□□□□□ -0.97
PPS1YBR276C EAF7P53911 425 aaKnown RBP8.98□□□□□ -0.97
PPS1YBR276C PSD2P53037 1138 aaKnown RBP8.95□□□□□ -0.98
PPS1YBR276C MYO4P32492 1471 aa8.93□□□□□ -0.98
PPS1YBR276C TOP2P06786 1428 aaKnown RBP8.93□□□□□ -0.98
PPS1YBR276C SMC4Q12267 1418 aa8.92□□□□□ -0.98
PPS1YBR276C SNF7P39929 240 aaKnown RBP8.91□□□□□ -0.98
PPS1YBR276C DNA2P38859 1522 aa8.91□□□□□ -0.98
PPS1YBR276C AIM44Q99299 758 aa8.9□□□□□ -0.99
PPS1YBR276C YCF1P39109 1515 aaKnown RBP8.89□□□□□ -0.99
PPS1YBR276C TSC11P40061 1430 aa8.89□□□□□ -0.99
PPS1YBR276C SNQ2P32568 1501 aaKnown RBP8.89□□□□□ -0.99
PPS1YBR276C FUN12P39730 1002 aaKnown RBP8.88□□□□□ -0.99
PPS1YBR276C YOR1P53049 1477 aa8.87□□□□□ -0.99
PPS1YBR276C SWR1Q05471 1514 aa8.86□□□□□ -0.99
PPS1YBR276C QCR6P00127 147 aa8.86□□□□□ -0.99
PPS1YBR276C KOG1P38873 1557 aa8.84□□□□□ -0.99
PPS1YBR276C RKR1Q04781 1562 aa8.84□□□□□ -0.99
PPS1YBR276C GEA1P47102 1408 aaPredicted RBP8.83□□□□□ -1
PPS1YBR276C FPR3P38911 411 aaKnown RBP8.83□□□□□ -1
PPS1YBR276C IFH1P39520 1085 aa8.82□□□□□ -1
PPS1YBR276C IRC20Q06554 1556 aa8.81□□□□□ -1
PPS1YBR276C ROX1P25042 368 aa8.81□□□□□ -1
PPS1YBR276C YGR130CP53278 816 aa8.81□□□□□ -1
PPS1YBR276C MHP1P43638 1398 aa8.8□□□□□ -1
PPS1YBR276C MMS1Q06211 1407 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms