RNA–Protein interactions for RNA: YDL095W

PMT1, Transcript of Protein O-mannosyltransferase of the ER membrane, yeastyeast

Gene PMT1, Length 2,454 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PMT1YDL095W SGS1P35187 1447 aa12.85□□□□□ -0.35
PMT1YDL095W SSN2P38931 1420 aa12.41□□□□□ -0.42
PMT1YDL095W SPA2P23201 1466 aaKnown RBP12.39□□□□□ -0.43
PMT1YDL095W INO80P53115 1489 aa12.3□□□□□ -0.44
PMT1YDL095W DRS1P32892 752 aaKnown RBP12.09□□□□□ -0.47
PMT1YDL095W TCB3Q03640 1545 aaKnown RBP12.07□□□□□ -0.48
PMT1YDL095W TY1B-DR4Q07793 1604 aa11.92□□□□□ -0.5
PMT1YDL095W HSL1P34244 1518 aa11.84□□□□□ -0.51
PMT1YDL095W SPT6P23615 1451 aaKnown RBP11.8□□□□□ -0.52
PMT1YDL095W XRN1P22147 1528 aaKnown RBP11.68□□□□□ -0.54
PMT1YDL095W HIR3P47171 1648 aa11.66□□□□□ -0.54
PMT1YDL095W MON2P48563 1636 aaPredicted RBP11.59□□□□□ -0.55
PMT1YDL095W SWR1Q05471 1514 aa11.57□□□□□ -0.56
PMT1YDL095W TAF2P23255 1407 aa11.53□□□□□ -0.56
PMT1YDL095W REV3P14284 1504 aa11.47□□□□□ -0.57
PMT1YDL095W THO2P53552 1597 aaKnown RBP11.33□□□□□ -0.6
PMT1YDL095W SSK2P53599 1579 aa11.32□□□□□ -0.6
PMT1YDL095W SIN3P22579 1536 aa11.3□□□□□ -0.6
PMT1YDL095W SKI3P17883 1432 aaKnown RBP11.28□□□□□ -0.6
PMT1YDL095W MMS22Q06164 1454 aa11.27□□□□□ -0.61
PMT1YDL095W RSE1Q04693 1361 aaKnown RBP11.23□□□□□ -0.61
PMT1YDL095W ESP1Q03018 1630 aa11.21□□□□□ -0.62
PMT1YDL095W SAS10Q12136 610 aaPredicted RBP11.2□□□□□ -0.62
PMT1YDL095W STU1P38198 1513 aa11.17□□□□□ -0.62
PMT1YDL095W DNA2P38859 1522 aa11.16□□□□□ -0.62
PMT1YDL095W CHD1P32657 1468 aa11.15□□□□□ -0.62
PMT1YDL095W MYO2P19524 1574 aaKnown RBP11.13□□□□□ -0.63
PMT1YDL095W ECM5Q03214 1411 aa11.12□□□□□ -0.63
PMT1YDL095W BUD4P47136 1447 aa11.1□□□□□ -0.63
PMT1YDL095W BPT1P14772 1559 aa11.1□□□□□ -0.63
PMT1YDL095W POL1P13382 1468 aa11.1□□□□□ -0.63
PMT1YDL095W ATG2P53855 1592 aa11.08□□□□□ -0.64
PMT1YDL095W KOG1P38873 1557 aa11.03□□□□□ -0.64
PMT1YDL095W YPK9Q12697 1472 aa11.02□□□□□ -0.65
PMT1YDL095W YTA7P40340 1379 aa11.02□□□□□ -0.65
PMT1YDL095W SCC2Q04002 1493 aa10.96□□□□□ -0.65
PMT1YDL095W RKR1Q04781 1562 aa10.95□□□□□ -0.66
PMT1YDL095W TRM732Q03496 1420 aa10.94□□□□□ -0.66
PMT1YDL095W YOR1P53049 1477 aa10.91□□□□□ -0.66
PMT1YDL095W PEP1P32319 1579 aa10.91□□□□□ -0.66
PMT1YDL095W UFD4P33202 1483 aa10.88□□□□□ -0.67
PMT1YDL095W MDS3P53094 1487 aa10.88□□□□□ -0.67
PMT1YDL095W RPO31P04051 1460 aa10.84□□□□□ -0.67
PMT1YDL095W IKI3Q06706 1349 aaKnown RBP10.84□□□□□ -0.67
PMT1YDL095W STH1P32597 1359 aa10.83□□□□□ -0.68
PMT1YDL095W TOP2P06786 1428 aaKnown RBP10.82□□□□□ -0.68
PMT1YDL095W IFH1P39520 1085 aa10.82□□□□□ -0.68
PMT1YDL095W MYO4P32492 1471 aa10.82□□□□□ -0.68
PMT1YDL095W SNQ2P32568 1501 aaKnown RBP10.78□□□□□ -0.68
PMT1YDL095W SSM4P40318 1319 aa10.78□□□□□ -0.68
PMT1YDL095W YCF1P39109 1515 aaKnown RBP10.78□□□□□ -0.68
PMT1YDL095W SMC4Q12267 1418 aa10.78□□□□□ -0.68
PMT1YDL095W RQC2Q12532 1038 aaKnown RBP10.75□□□□□ -0.69
PMT1YDL095W TY2B-LR1P0C2J3 1770 aa10.73□□□□□ -0.69
PMT1YDL095W TY2B-FP0CX63 1770 aa10.73□□□□□ -0.69
PMT1YDL095W TY2B-GR2P0CX64 1770 aa10.73□□□□□ -0.69
PMT1YDL095W TY2B-CP25384 1770 aa10.73□□□□□ -0.69
PMT1YDL095W TY2B-DR2Q03494 1770 aa10.73□□□□□ -0.69
PMT1YDL095W TY1B-DR1Q03855 1755 aa10.73□□□□□ -0.69
PMT1YDL095W TY2B-DR3Q07791 1770 aaKnown RBP10.73□□□□□ -0.69
PMT1YDL095W TY2B-OR1Q12113 1770 aa10.73□□□□□ -0.69
PMT1YDL095W TY2B-DR1Q12472 1770 aa10.73□□□□□ -0.69
PMT1YDL095W TY2B-OR2Q12501 1770 aa10.73□□□□□ -0.69
PMT1YDL095W TY1B-DR3Q99231 1755 aa10.72□□□□□ -0.69
PMT1YDL095W NSR1P27476 414 aaKnown RBP RIP-Chip data10.72□□□□□ -0.69not detected
PMT1YDL095W TAF7Q05021 590 aa10.72□□□□□ -0.69
PMT1YDL095W PDR15Q04182 1529 aaKnown RBP10.68□□□□□ -0.7
PMT1YDL095W GEA1P47102 1408 aaPredicted RBP10.66□□□□□ -0.7
PMT1YDL095W MLP2P40457 1679 aa10.65□□□□□ -0.7
PMT1YDL095W TY2B-BQ12491 1770 aa10.65□□□□□ -0.7
PMT1YDL095W SPP41P38904 1435 aa10.61□□□□□ -0.71
PMT1YDL095W NUP170P38181 1502 aa10.6□□□□□ -0.71
PMT1YDL095W ULS1Q08562 1619 aa10.58□□□□□ -0.72
PMT1YDL095W TSC11P40061 1430 aa10.58□□□□□ -0.72
PMT1YDL095W RTT106P40161 455 aa10.55□□□□□ -0.72
PMT1YDL095W PAN1P32521 1480 aa10.55□□□□□ -0.72
PMT1YDL095W TY1B-HO13535 1793 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-DR5P0C2I2 1755 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-DR6P0C2I3 1755 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-LR2P0C2I5 1755 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-LR3P0C2I6 1755 aaKnown RBP10.53□□□□□ -0.72
PMT1YDL095W TY1B-PR1P0C2I9 1755 aaKnown RBP10.53□□□□□ -0.72
PMT1YDL095W TY1B-PR2P0C2J0 1756 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-PR3P0C2J1 1755 aaKnown RBP10.53□□□□□ -0.72
PMT1YDL095W TY1B-JR1P47098 1755 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-ML2Q03434 1755 aaKnown RBP10.53□□□□□ -0.72
PMT1YDL095W TY1B-ER1Q03612 1755 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-ML1Q04711 1755 aaKnown RBP10.53□□□□□ -0.72
PMT1YDL095W TY1B-GR2Q12269 1755 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-OLQ12273 1755 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-PLQ12414 1755 aaKnown RBP10.53□□□□□ -0.72
PMT1YDL095W TY3B-GQ99315 1547 aa10.53□□□□□ -0.72
PMT1YDL095W TY1B-BRQ12193 1756 aa10.51□□□□□ -0.73
PMT1YDL095W TY1B-GR3Q12316 1755 aa10.51□□□□□ -0.73
PMT1YDL095W TY1B-ORQ92393 1755 aa10.51□□□□□ -0.73
PMT1YDL095W VTH1P40438 1549 aa10.5□□□□□ -0.73
PMT1YDL095W VTH2P40890 1549 aa10.5□□□□□ -0.73
PMT1YDL095W NOP2P40991 618 aaKnown RBP10.47□□□□□ -0.73
PMT1YDL095W POL5P39985 1022 aaKnown RBP10.45□□□□□ -0.74
PMT1YDL095W VPS15P22219 1454 aa10.45□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms