RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeastyeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSM3YBR272C DRS1P32892 752 aaKnown RBP12.11□□□□□ -0.47
HSM3YBR272C INO80P53115 1489 aa11.9□□□□□ -0.51
HSM3YBR272C MON2P48563 1636 aaPredicted RBP11.86□□□□□ -0.51
HSM3YBR272C MTC1P47018 478 aaKnown RBP11.66□□□□□ -0.54
HSM3YBR272C RQC2Q12532 1038 aaKnown RBP11.34□□□□□ -0.59
HSM3YBR272C DNA2P38859 1522 aa11.33□□□□□ -0.6
HSM3YBR272C FAP1P53971 965 aa11.19□□□□□ -0.62
HSM3YBR272C SWR1Q05471 1514 aa11.18□□□□□ -0.62
HSM3YBR272C RSE1Q04693 1361 aaKnown RBP11.12□□□□□ -0.63
HSM3YBR272C KOG1P38873 1557 aa11.1□□□□□ -0.63
HSM3YBR272C BFR2Q06631 534 aaKnown RBP10.97□□□□□ -0.65
HSM3YBR272C TCB3Q03640 1545 aaKnown RBP10.92□□□□□ -0.66
HSM3YBR272C TY1B-DR4Q07793 1604 aa10.9□□□□□ -0.66
HSM3YBR272C PRY3P47033 881 aa10.6□□□□□ -0.71
HSM3YBR272C SGS1P35187 1447 aa10.56□□□□□ -0.72
HSM3YBR272C SPA2P23201 1466 aaKnown RBP10.53□□□□□ -0.72
HSM3YBR272C SPT6P23615 1451 aaKnown RBP10.5□□□□□ -0.73
HSM3YBR272C HSL1P34244 1518 aa10.48□□□□□ -0.73
HSM3YBR272C ECM5Q03214 1411 aa10.42□□□□□ -0.74
HSM3YBR272C TAF7Q05021 590 aa10.34□□□□□ -0.75
HSM3YBR272C TFA1P36100 482 aa10.31□□□□□ -0.76
HSM3YBR272C BUD4P47136 1447 aa10.28□□□□□ -0.76
HSM3YBR272C THO2P53552 1597 aaKnown RBP10.26□□□□□ -0.77
HSM3YBR272C HIR3P47171 1648 aa10.23□□□□□ -0.77
HSM3YBR272C MDS3P53094 1487 aa10.22□□□□□ -0.77
HSM3YBR272C AVT3P36062 692 aa10.17□□□□□ -0.78
HSM3YBR272C DIP2Q12220 943 aaPredicted RBP10.16□□□□□ -0.78
HSM3YBR272C URN1Q06525 465 aaKnown RBP10.13□□□□□ -0.79
HSM3YBR272C REV3P14284 1504 aa10.11□□□□□ -0.79
HSM3YBR272C PEP1P32319 1579 aa10.04□□□□□ -0.8
HSM3YBR272C XRN1P22147 1528 aaKnown RBP10.01□□□□□ -0.81
HSM3YBR272C BPT1P14772 1559 aa9.97□□□□□ -0.81
HSM3YBR272C YCK3P39962 524 aa9.95□□□□□ -0.82
HSM3YBR272C ATG2P53855 1592 aa9.92□□□□□ -0.82
HSM3YBR272C HAA1Q12753 694 aaKnown RBP9.83□□□□□ -0.84
HSM3YBR272C MIF2P35201 549 aa9.82□□□□□ -0.84
HSM3YBR272C YCF1P39109 1515 aaKnown RBP9.79□□□□□ -0.84
HSM3YBR272C SKI3P17883 1432 aaKnown RBP9.77□□□□□ -0.84
HSM3YBR272C EBP2P36049 427 aaKnown RBP9.74□□□□□ -0.85
HSM3YBR272C TAF2P23255 1407 aa9.74□□□□□ -0.85
HSM3YBR272C AAD16Q02895 342 aa9.73□□□□□ -0.85
HSM3YBR272C SIS2P36024 562 aa9.72□□□□□ -0.85
HSM3YBR272C SSK2P53599 1579 aa9.7□□□□□ -0.86
HSM3YBR272C CAB3P36076 571 aa9.69□□□□□ -0.86
HSM3YBR272C NOP2P40991 618 aaKnown RBP9.65□□□□□ -0.87
HSM3YBR272C SIN3P22579 1536 aa9.62□□□□□ -0.87
HSM3YBR272C UFD4P33202 1483 aa9.6□□□□□ -0.87
HSM3YBR272C PRI1P10363 409 aa9.55□□□□□ -0.88
HSM3YBR272C SSN2P38931 1420 aa9.54□□□□□ -0.88
HSM3YBR272C MET5P47169 1442 aa9.54□□□□□ -0.88
HSM3YBR272C MYO2P19524 1574 aaKnown RBP9.52□□□□□ -0.88
HSM3YBR272C ESP1Q03018 1630 aa9.51□□□□□ -0.89
HSM3YBR272C LTE1P07866 1435 aa9.51□□□□□ -0.89
HSM3YBR272C DNF1P32660 1571 aa9.48□□□□□ -0.89
HSM3YBR272C CHD1P32657 1468 aa9.47□□□□□ -0.89
HSM3YBR272C CDC25P04821 1589 aa9.47□□□□□ -0.89
HSM3YBR272C YFR006WP43590 535 aa9.47□□□□□ -0.89
HSM3YBR272C SCC2Q04002 1493 aa9.46□□□□□ -0.9
HSM3YBR272C ESC1Q03661 1658 aaKnown RBP9.45□□□□□ -0.9
HSM3YBR272C ABP1P15891 592 aaKnown RBP9.44□□□□□ -0.9
HSM3YBR272C YFR016CP43597 1233 aaKnown RBP9.43□□□□□ -0.9
HSM3YBR272C BNI1P41832 1953 aa9.43□□□□□ -0.9
HSM3YBR272C RPA190P10964 1664 aaKnown RBP9.43□□□□□ -0.9
HSM3YBR272C YPK9Q12697 1472 aa9.42□□□□□ -0.9
HSM3YBR272C ITT1Q04638 464 aa9.41□□□□□ -0.9
HSM3YBR272C RKR1Q04781 1562 aa9.4□□□□□ -0.9
HSM3YBR272C RPO31P04051 1460 aa9.39□□□□□ -0.91
HSM3YBR272C GEA2P39993 1459 aaKnown RBP9.37□□□□□ -0.91
HSM3YBR272C PAN1P32521 1480 aa9.37□□□□□ -0.91
HSM3YBR272C ISW2Q08773 1120 aa9.34□□□□□ -0.91
HSM3YBR272C YRB30P53107 440 aaPredicted RBP9.33□□□□□ -0.92
HSM3YBR272C TY1B-BRQ12193 1756 aa9.33□□□□□ -0.92
HSM3YBR272C TY1B-GR3Q12316 1755 aa9.33□□□□□ -0.92
HSM3YBR272C TY1B-ORQ92393 1755 aa9.33□□□□□ -0.92
HSM3YBR272C TY2B-LR1P0C2J3 1770 aa9.32□□□□□ -0.92
HSM3YBR272C TY2B-FP0CX63 1770 aa9.32□□□□□ -0.92
HSM3YBR272C TY2B-GR2P0CX64 1770 aa9.32□□□□□ -0.92
HSM3YBR272C TY2B-CP25384 1770 aa9.32□□□□□ -0.92
HSM3YBR272C TY2B-DR2Q03494 1770 aa9.32□□□□□ -0.92
HSM3YBR272C TY1B-DR1Q03855 1755 aa9.32□□□□□ -0.92
HSM3YBR272C TY2B-DR3Q07791 1770 aaKnown RBP9.32□□□□□ -0.92
HSM3YBR272C TY2B-OR1Q12113 1770 aa9.32□□□□□ -0.92
HSM3YBR272C TY2B-DR1Q12472 1770 aa9.32□□□□□ -0.92
HSM3YBR272C TY2B-OR2Q12501 1770 aa9.32□□□□□ -0.92
HSM3YBR272C MMS1Q06211 1407 aa9.31□□□□□ -0.92
HSM3YBR272C RPS0BP46654 252 aaKnown RBP9.3□□□□□ -0.92
HSM3YBR272C RPG1P38249 964 aaKnown RBP9.25□□□□□ -0.93
HSM3YBR272C TRM732Q03496 1420 aa9.22□□□□□ -0.93
HSM3YBR272C DRS2P39524 1355 aa9.22□□□□□ -0.93
HSM3YBR272C MMS22Q06164 1454 aa9.21□□□□□ -0.93
HSM3YBR272C TOP2P06786 1428 aaKnown RBP9.2□□□□□ -0.94
HSM3YBR272C IRC20Q06554 1556 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-HO13535 1793 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-DR5P0C2I2 1755 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-DR6P0C2I3 1755 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-LR2P0C2I5 1755 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-LR3P0C2I6 1755 aaKnown RBP9.19□□□□□ -0.94
HSM3YBR272C TY1B-PR1P0C2I9 1755 aaKnown RBP9.19□□□□□ -0.94
HSM3YBR272C TY1B-PR2P0C2J0 1756 aa9.19□□□□□ -0.94
HSM3YBR272C TY1B-PR3P0C2J1 1755 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms