RNA–Protein interactions for RNA: YJR116W

TDA4, Transcript of Putative protein of unknown function, yeastyeast

Gene TDA4, Length 840 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDA4YJR116W SGS1P35187 1447 aa13.53□□□□□ -0.24
TDA4YJR116W INO80P53115 1489 aa13.26□□□□□ -0.29
TDA4YJR116W TCB3Q03640 1545 aaKnown RBP13.04□□□□□ -0.32
TDA4YJR116W SPA2P23201 1466 aaKnown RBP13.03□□□□□ -0.32
TDA4YJR116W SSN2P38931 1420 aa12.95□□□□□ -0.34
TDA4YJR116W TY1B-DR4Q07793 1604 aa12.81□□□□□ -0.36
TDA4YJR116W MON2P48563 1636 aaPredicted RBP12.67□□□□□ -0.38
TDA4YJR116W DRS1P32892 752 aaKnown RBP12.67□□□□□ -0.38
TDA4YJR116W HSL1P34244 1518 aa12.61□□□□□ -0.39
TDA4YJR116W SPT6P23615 1451 aaKnown RBP12.6□□□□□ -0.39
TDA4YJR116W SWR1Q05471 1514 aa12.49□□□□□ -0.41
TDA4YJR116W HIR3P47171 1648 aa12.4□□□□□ -0.42
TDA4YJR116W XRN1P22147 1528 aaKnown RBP12.35□□□□□ -0.43
TDA4YJR116W REV3P14284 1504 aa12.18□□□□□ -0.46
TDA4YJR116W THO2P53552 1597 aaKnown RBP12.14□□□□□ -0.47
TDA4YJR116W KOG1P38873 1557 aa12.12□□□□□ -0.47
TDA4YJR116W SIN3P22579 1536 aa12.1□□□□□ -0.47
TDA4YJR116W DNA2P38859 1522 aa12.08□□□□□ -0.48
TDA4YJR116W TAF2P23255 1407 aa12.05□□□□□ -0.48
TDA4YJR116W SSK2P53599 1579 aa12.03□□□□□ -0.48
TDA4YJR116W MTC1P47018 478 aaKnown RBP11.98□□□□□ -0.49
TDA4YJR116W BUD4P47136 1447 aa11.96□□□□□ -0.49
TDA4YJR116W MYO2P19524 1574 aaKnown RBP11.96□□□□□ -0.5
TDA4YJR116W ESP1Q03018 1630 aa11.94□□□□□ -0.5
TDA4YJR116W ECM5Q03214 1411 aa11.9□□□□□ -0.5
TDA4YJR116W SKI3P17883 1432 aaKnown RBP11.86□□□□□ -0.51
TDA4YJR116W ATG2P53855 1592 aa11.83□□□□□ -0.52
TDA4YJR116W YPK9Q12697 1472 aa11.76□□□□□ -0.53
TDA4YJR116W POL1P13382 1468 aa11.74□□□□□ -0.53
TDA4YJR116W CHD1P32657 1468 aa11.73□□□□□ -0.53
TDA4YJR116W MDS3P53094 1487 aa11.72□□□□□ -0.53
TDA4YJR116W STU1P38198 1513 aa11.7□□□□□ -0.54
TDA4YJR116W YTA7P40340 1379 aa11.69□□□□□ -0.54
TDA4YJR116W PEP1P32319 1579 aa11.69□□□□□ -0.54
TDA4YJR116W MMS22Q06164 1454 aa11.69□□□□□ -0.54
TDA4YJR116W SCC2Q04002 1493 aa11.62□□□□□ -0.55
TDA4YJR116W RKR1Q04781 1562 aa11.62□□□□□ -0.55
TDA4YJR116W RPO31P04051 1460 aa11.57□□□□□ -0.56
TDA4YJR116W YOR1P53049 1477 aa11.57□□□□□ -0.56
TDA4YJR116W SAS10Q12136 610 aaPredicted RBP11.56□□□□□ -0.56
TDA4YJR116W UFD4P33202 1483 aa11.53□□□□□ -0.56
TDA4YJR116W BPT1P14772 1559 aa11.53□□□□□ -0.56
TDA4YJR116W TOP2P06786 1428 aaKnown RBP11.52□□□□□ -0.56
TDA4YJR116W MYO4P32492 1471 aa11.51□□□□□ -0.57
TDA4YJR116W SMC4Q12267 1418 aa11.5□□□□□ -0.57
TDA4YJR116W YCF1P39109 1515 aaKnown RBP11.47□□□□□ -0.57
TDA4YJR116W TAF7Q05021 590 aa11.46□□□□□ -0.57
TDA4YJR116W TY2B-LR1P0C2J3 1770 aa11.41□□□□□ -0.58
TDA4YJR116W TY2B-FP0CX63 1770 aa11.41□□□□□ -0.58
TDA4YJR116W TY2B-GR2P0CX64 1770 aa11.41□□□□□ -0.58
TDA4YJR116W TY2B-CP25384 1770 aa11.41□□□□□ -0.58
TDA4YJR116W TY2B-DR2Q03494 1770 aa11.41□□□□□ -0.58
TDA4YJR116W TY1B-DR1Q03855 1755 aa11.41□□□□□ -0.58
TDA4YJR116W TY2B-DR3Q07791 1770 aaKnown RBP11.41□□□□□ -0.58
TDA4YJR116W TY2B-OR1Q12113 1770 aa11.41□□□□□ -0.58
TDA4YJR116W TY2B-DR1Q12472 1770 aa11.41□□□□□ -0.58
TDA4YJR116W TY2B-OR2Q12501 1770 aa11.41□□□□□ -0.58
TDA4YJR116W RQC2Q12532 1038 aaKnown RBP11.37□□□□□ -0.59
TDA4YJR116W STH1P32597 1359 aa11.36□□□□□ -0.59
TDA4YJR116W TY1B-DR3Q99231 1755 aa11.36□□□□□ -0.59
TDA4YJR116W SNQ2P32568 1501 aaKnown RBP11.34□□□□□ -0.59
TDA4YJR116W TY2B-BQ12491 1770 aa11.32□□□□□ -0.6
TDA4YJR116W SPP41P38904 1435 aa11.28□□□□□ -0.6
TDA4YJR116W MLP2P40457 1679 aa11.28□□□□□ -0.6
TDA4YJR116W TRM732Q03496 1420 aa11.26□□□□□ -0.61
TDA4YJR116W IFH1P39520 1085 aa11.24□□□□□ -0.61
TDA4YJR116W IKI3Q06706 1349 aaKnown RBP11.24□□□□□ -0.61
TDA4YJR116W TY1B-HO13535 1793 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-DR5P0C2I2 1755 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-DR6P0C2I3 1755 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-LR2P0C2I5 1755 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-LR3P0C2I6 1755 aaKnown RBP11.23□□□□□ -0.61
TDA4YJR116W TY1B-PR1P0C2I9 1755 aaKnown RBP11.23□□□□□ -0.61
TDA4YJR116W TY1B-PR2P0C2J0 1756 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-PR3P0C2J1 1755 aaKnown RBP11.23□□□□□ -0.61
TDA4YJR116W TY1B-JR1P47098 1755 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-ML2Q03434 1755 aaKnown RBP11.23□□□□□ -0.61
TDA4YJR116W TY1B-ER1Q03612 1755 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-ML1Q04711 1755 aaKnown RBP11.23□□□□□ -0.61
TDA4YJR116W TY1B-GR2Q12269 1755 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-OLQ12273 1755 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-PLQ12414 1755 aaKnown RBP11.23□□□□□ -0.61
TDA4YJR116W TY1B-BRQ12193 1756 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-GR3Q12316 1755 aa11.23□□□□□ -0.61
TDA4YJR116W TY1B-ORQ92393 1755 aa11.23□□□□□ -0.61
TDA4YJR116W CDC25P04821 1589 aa11.21□□□□□ -0.61
TDA4YJR116W PDR15Q04182 1529 aaKnown RBP11.21□□□□□ -0.61
TDA4YJR116W RSE1Q04693 1361 aaKnown RBP11.2□□□□□ -0.62
TDA4YJR116W TSC11P40061 1430 aa11.18□□□□□ -0.62
TDA4YJR116W VTH1P40438 1549 aa11.18□□□□□ -0.62
TDA4YJR116W VTH2P40890 1549 aa11.18□□□□□ -0.62
TDA4YJR116W PAN1P32521 1480 aa11.18□□□□□ -0.62
TDA4YJR116W GEA1P47102 1408 aaPredicted RBP11.17□□□□□ -0.62
TDA4YJR116W ULS1Q08562 1619 aa11.13□□□□□ -0.63
TDA4YJR116W ESC1Q03661 1658 aaKnown RBP11.11□□□□□ -0.63
TDA4YJR116W RTT106P40161 455 aa11.1□□□□□ -0.63
TDA4YJR116W SNT2P53127 1403 aa11.07□□□□□ -0.64
TDA4YJR116W TY1B-JR2P47100 1755 aaKnown RBP11.06□□□□□ -0.64
TDA4YJR116W TY1B-ER2Q03619 1755 aa11.06□□□□□ -0.64
TDA4YJR116W TY1B-MR1Q04214 1755 aa11.06□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms