RNA–Protein interactions for RNA: YDR105C

TMS1, Transcript of Vacuolar membrane protein of unknown function, yeastyeast

Gene TMS1, Length 1,422 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TMS1YDR105C SGS1P35187 1447 aa14.29□□□□□ -0.12
TMS1YDR105C INO80P53115 1489 aa14.06□□□□□ -0.16
TMS1YDR105C TCB3Q03640 1545 aaKnown RBP13.88□□□□□ -0.19
TMS1YDR105C SPA2P23201 1466 aaKnown RBP13.74□□□□□ -0.21
TMS1YDR105C TY1B-DR4Q07793 1604 aa13.7□□□□□ -0.22
TMS1YDR105C SSN2P38931 1420 aa13.67□□□□□ -0.22
TMS1YDR105C MON2P48563 1636 aaPredicted RBP13.65□□□□□ -0.22
TMS1YDR105C HSL1P34244 1518 aa13.47□□□□□ -0.25
TMS1YDR105C SPT6P23615 1451 aaKnown RBP13.43□□□□□ -0.26
TMS1YDR105C SWR1Q05471 1514 aa13.4□□□□□ -0.26
TMS1YDR105C DRS1P32892 752 aaKnown RBP13.28□□□□□ -0.28
TMS1YDR105C HIR3P47171 1648 aa13.23□□□□□ -0.29
TMS1YDR105C XRN1P22147 1528 aaKnown RBP13.14□□□□□ -0.31
TMS1YDR105C KOG1P38873 1557 aa12.99□□□□□ -0.33
TMS1YDR105C REV3P14284 1504 aa12.99□□□□□ -0.33
TMS1YDR105C DNA2P38859 1522 aa12.98□□□□□ -0.33
TMS1YDR105C THO2P53552 1597 aaKnown RBP12.92□□□□□ -0.34
TMS1YDR105C SIN3P22579 1536 aa12.87□□□□□ -0.35
TMS1YDR105C SSK2P53599 1579 aa12.81□□□□□ -0.36
TMS1YDR105C TAF2P23255 1407 aa12.81□□□□□ -0.36
TMS1YDR105C BUD4P47136 1447 aa12.77□□□□□ -0.37
TMS1YDR105C ESP1Q03018 1630 aa12.72□□□□□ -0.37
TMS1YDR105C MYO2P19524 1574 aaKnown RBP12.72□□□□□ -0.37
TMS1YDR105C ECM5Q03214 1411 aa12.68□□□□□ -0.38
TMS1YDR105C ATG2P53855 1592 aa12.65□□□□□ -0.38
TMS1YDR105C SKI3P17883 1432 aaKnown RBP12.61□□□□□ -0.39
TMS1YDR105C MDS3P53094 1487 aa12.56□□□□□ -0.4
TMS1YDR105C PEP1P32319 1579 aa12.49□□□□□ -0.41
TMS1YDR105C YPK9Q12697 1472 aa12.48□□□□□ -0.41
TMS1YDR105C POL1P13382 1468 aa12.43□□□□□ -0.42
TMS1YDR105C STU1P38198 1513 aa12.4□□□□□ -0.42
TMS1YDR105C SCC2Q04002 1493 aa12.38□□□□□ -0.43
TMS1YDR105C RKR1Q04781 1562 aa12.36□□□□□ -0.43
TMS1YDR105C MMS22Q06164 1454 aa12.32□□□□□ -0.44
TMS1YDR105C CHD1P32657 1468 aa12.31□□□□□ -0.44
TMS1YDR105C RPO31P04051 1460 aa12.29□□□□□ -0.44
TMS1YDR105C UFD4P33202 1483 aa12.28□□□□□ -0.44
TMS1YDR105C YTA7P40340 1379 aa12.28□□□□□ -0.44
TMS1YDR105C YOR1P53049 1477 aa12.27□□□□□ -0.45
TMS1YDR105C BPT1P14772 1559 aa12.25□□□□□ -0.45
TMS1YDR105C TOP2P06786 1428 aaKnown RBP12.22□□□□□ -0.45
TMS1YDR105C YCF1P39109 1515 aaKnown RBP12.21□□□□□ -0.46
TMS1YDR105C TY2B-LR1P0C2J3 1770 aa12.19□□□□□ -0.46
TMS1YDR105C TY2B-FP0CX63 1770 aa12.19□□□□□ -0.46
TMS1YDR105C TY2B-GR2P0CX64 1770 aa12.19□□□□□ -0.46
TMS1YDR105C TY2B-CP25384 1770 aa12.19□□□□□ -0.46
TMS1YDR105C TY2B-DR2Q03494 1770 aa12.19□□□□□ -0.46
TMS1YDR105C TY1B-DR1Q03855 1755 aa12.19□□□□□ -0.46
TMS1YDR105C TY2B-DR3Q07791 1770 aaKnown RBP12.19□□□□□ -0.46
TMS1YDR105C TY2B-OR1Q12113 1770 aa12.19□□□□□ -0.46
TMS1YDR105C TY2B-DR1Q12472 1770 aa12.19□□□□□ -0.46
TMS1YDR105C TY2B-OR2Q12501 1770 aa12.19□□□□□ -0.46
TMS1YDR105C MYO4P32492 1471 aa12.18□□□□□ -0.46
TMS1YDR105C SMC4Q12267 1418 aa12.18□□□□□ -0.46
TMS1YDR105C SAS10Q12136 610 aaPredicted RBP12.13□□□□□ -0.47
TMS1YDR105C TY1B-DR3Q99231 1755 aa12.13□□□□□ -0.47
TMS1YDR105C TY2B-BQ12491 1770 aa12.08□□□□□ -0.48
TMS1YDR105C RQC2Q12532 1038 aaKnown RBP12.06□□□□□ -0.48
TMS1YDR105C RSE1Q04693 1361 aaKnown RBP12.01□□□□□ -0.49
TMS1YDR105C SNQ2P32568 1501 aaKnown RBP12.01□□□□□ -0.49
TMS1YDR105C TY1B-BRQ12193 1756 aa12□□□□□ -0.49
TMS1YDR105C TY1B-GR3Q12316 1755 aa12□□□□□ -0.49
TMS1YDR105C TY1B-ORQ92393 1755 aa12□□□□□ -0.49
TMS1YDR105C MLP2P40457 1679 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-HO13535 1793 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-DR5P0C2I2 1755 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-DR6P0C2I3 1755 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-LR2P0C2I5 1755 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-LR3P0C2I6 1755 aaKnown RBP11.99□□□□□ -0.49
TMS1YDR105C TY1B-PR1P0C2I9 1755 aaKnown RBP11.99□□□□□ -0.49
TMS1YDR105C TY1B-PR2P0C2J0 1756 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-PR3P0C2J1 1755 aaKnown RBP11.99□□□□□ -0.49
TMS1YDR105C TY1B-JR1P47098 1755 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-ML2Q03434 1755 aaKnown RBP11.99□□□□□ -0.49
TMS1YDR105C TY1B-ER1Q03612 1755 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-ML1Q04711 1755 aaKnown RBP11.99□□□□□ -0.49
TMS1YDR105C TY1B-GR2Q12269 1755 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-OLQ12273 1755 aa11.99□□□□□ -0.49
TMS1YDR105C TY1B-PLQ12414 1755 aaKnown RBP11.99□□□□□ -0.49
TMS1YDR105C CDC25P04821 1589 aa11.99□□□□□ -0.49
TMS1YDR105C SPP41P38904 1435 aa11.97□□□□□ -0.49
TMS1YDR105C STH1P32597 1359 aa11.96□□□□□ -0.49
TMS1YDR105C TAF7Q05021 590 aa11.96□□□□□ -0.49
TMS1YDR105C ESC1Q03661 1658 aaKnown RBP11.91□□□□□ -0.5
TMS1YDR105C PAN1P32521 1480 aa11.9□□□□□ -0.5
TMS1YDR105C VTH1P40438 1549 aa11.9□□□□□ -0.5
TMS1YDR105C VTH2P40890 1549 aa11.9□□□□□ -0.5
TMS1YDR105C PDR15Q04182 1529 aaKnown RBP11.9□□□□□ -0.5
TMS1YDR105C MTC1P47018 478 aaKnown RBP11.9□□□□□ -0.5
TMS1YDR105C TSC11P40061 1430 aa11.86□□□□□ -0.51
TMS1YDR105C ULS1Q08562 1619 aa11.84□□□□□ -0.51
TMS1YDR105C TRM732Q03496 1420 aa11.84□□□□□ -0.51
TMS1YDR105C IFH1P39520 1085 aa11.83□□□□□ -0.52
TMS1YDR105C TY1B-JR2P47100 1755 aaKnown RBP11.8□□□□□ -0.52
TMS1YDR105C TY1B-ER2Q03619 1755 aa11.8□□□□□ -0.52
TMS1YDR105C TY1B-MR1Q04214 1755 aa11.8□□□□□ -0.52
TMS1YDR105C TY1B-MR2Q04670 1755 aaKnown RBP11.8□□□□□ -0.52
TMS1YDR105C TY1B-LR1Q12088 1755 aaKnown RBP11.8□□□□□ -0.52
TMS1YDR105C TY1B-NL1Q12112 1755 aa11.8□□□□□ -0.52
TMS1YDR105C TY1B-GR1Q12141 1755 aa11.8□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms