RNA–Protein interactions for RNA: YFR048W

RMD8, Transcript of Cytosolic protein required for sporulation, yeastyeast

Gene RMD8, Length 1,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RMD8YFR048W SGS1P35187 1447 aa11.88□□□□□ -0.51
RMD8YFR048W SPA2P23201 1466 aaKnown RBP11.76□□□□□ -0.53
RMD8YFR048W SSN2P38931 1420 aa11.62□□□□□ -0.55
RMD8YFR048W INO80P53115 1489 aa11.45□□□□□ -0.58
RMD8YFR048W DRS1P32892 752 aaKnown RBP11.21□□□□□ -0.62
RMD8YFR048W TCB3Q03640 1545 aaKnown RBP11.09□□□□□ -0.63
RMD8YFR048W SKI3P17883 1432 aaKnown RBP10.96□□□□□ -0.65
RMD8YFR048W TY1B-DR4Q07793 1604 aa10.93□□□□□ -0.66
RMD8YFR048W HSL1P34244 1518 aa10.84□□□□□ -0.67
RMD8YFR048W SPT6P23615 1451 aaKnown RBP10.77□□□□□ -0.69
RMD8YFR048W CHD1P32657 1468 aa10.71□□□□□ -0.7
RMD8YFR048W XRN1P22147 1528 aaKnown RBP10.69□□□□□ -0.7
RMD8YFR048W HIR3P47171 1648 aa10.68□□□□□ -0.7
RMD8YFR048W MMS22Q06164 1454 aa10.66□□□□□ -0.7
RMD8YFR048W REV3P14284 1504 aa10.57□□□□□ -0.72
RMD8YFR048W SIN3P22579 1536 aa10.54□□□□□ -0.72
RMD8YFR048W THO2P53552 1597 aaKnown RBP10.52□□□□□ -0.73
RMD8YFR048W SSK2P53599 1579 aa10.5□□□□□ -0.73
RMD8YFR048W SWR1Q05471 1514 aa10.43□□□□□ -0.74
RMD8YFR048W TAF2P23255 1407 aa10.4□□□□□ -0.74
RMD8YFR048W UFD4P33202 1483 aa10.4□□□□□ -0.74
RMD8YFR048W STU1P38198 1513 aa10.38□□□□□ -0.75
RMD8YFR048W NSR1P27476 414 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
RMD8YFR048W MON2P48563 1636 aaPredicted RBP10.37□□□□□ -0.75
RMD8YFR048W ESP1Q03018 1630 aa10.36□□□□□ -0.75
RMD8YFR048W POL1P13382 1468 aa10.36□□□□□ -0.75
RMD8YFR048W RSE1Q04693 1361 aaKnown RBP10.35□□□□□ -0.75
RMD8YFR048W MYO2P19524 1574 aaKnown RBP10.34□□□□□ -0.75
RMD8YFR048W TRM732Q03496 1420 aa10.33□□□□□ -0.76
RMD8YFR048W NOP2P40991 618 aaKnown RBP10.32□□□□□ -0.76
RMD8YFR048W YTA7P40340 1379 aa10.31□□□□□ -0.76
RMD8YFR048W BPT1P14772 1559 aa10.26□□□□□ -0.77
RMD8YFR048W IKI3Q06706 1349 aaKnown RBP10.26□□□□□ -0.77
RMD8YFR048W SAS10Q12136 610 aaPredicted RBP10.24□□□□□ -0.77
RMD8YFR048W ECM5Q03214 1411 aa10.24□□□□□ -0.77
RMD8YFR048W SCC2Q04002 1493 aa10.21□□□□□ -0.77
RMD8YFR048W YPK9Q12697 1472 aa10.21□□□□□ -0.77
RMD8YFR048W BUD4P47136 1447 aa10.17□□□□□ -0.78
RMD8YFR048W SPP41P38904 1435 aa10.17□□□□□ -0.78
RMD8YFR048W NUP170P38181 1502 aa10.16□□□□□ -0.78
RMD8YFR048W DNA2P38859 1522 aa10.16□□□□□ -0.78
RMD8YFR048W MYO4P32492 1471 aa10.15□□□□□ -0.79
RMD8YFR048W YOR1P53049 1477 aa10.15□□□□□ -0.79
RMD8YFR048W ATG2P53855 1592 aa10.14□□□□□ -0.79
RMD8YFR048W SSM4P40318 1319 aa10.11□□□□□ -0.79
RMD8YFR048W RKR1Q04781 1562 aa10.11□□□□□ -0.79
RMD8YFR048W SNQ2P32568 1501 aaKnown RBP10.04□□□□□ -0.8
RMD8YFR048W RPO31P04051 1460 aa10.02□□□□□ -0.81
RMD8YFR048W SMC4Q12267 1418 aa10.02□□□□□ -0.81
RMD8YFR048W TAF7Q05021 590 aa10.01□□□□□ -0.81
RMD8YFR048W TOP2P06786 1428 aaKnown RBP10□□□□□ -0.81
RMD8YFR048W STH1P32597 1359 aa10□□□□□ -0.81
RMD8YFR048W PEP1P32319 1579 aa9.98□□□□□ -0.81
RMD8YFR048W ENP1P38333 483 aaKnown RBP9.97□□□□□ -0.81
RMD8YFR048W YCF1P39109 1515 aaKnown RBP9.94□□□□□ -0.82
RMD8YFR048W GEA1P47102 1408 aaPredicted RBP9.93□□□□□ -0.82
RMD8YFR048W POL5P39985 1022 aaKnown RBP9.92□□□□□ -0.82
RMD8YFR048W PDR15Q04182 1529 aaKnown RBP9.91□□□□□ -0.82
RMD8YFR048W MLP2P40457 1679 aa9.91□□□□□ -0.82
RMD8YFR048W TY1B-DR3Q99231 1755 aa9.9□□□□□ -0.82
RMD8YFR048W TSC11P40061 1430 aa9.89□□□□□ -0.83
RMD8YFR048W PAN1P32521 1480 aa9.88□□□□□ -0.83
RMD8YFR048W TY2B-LR1P0C2J3 1770 aa9.88□□□□□ -0.83
RMD8YFR048W TY2B-FP0CX63 1770 aa9.88□□□□□ -0.83
RMD8YFR048W TY2B-GR2P0CX64 1770 aa9.88□□□□□ -0.83
RMD8YFR048W TY2B-CP25384 1770 aa9.88□□□□□ -0.83
RMD8YFR048W TY2B-DR2Q03494 1770 aa9.88□□□□□ -0.83
RMD8YFR048W TY1B-DR1Q03855 1755 aa9.88□□□□□ -0.83
RMD8YFR048W TY2B-DR3Q07791 1770 aaKnown RBP9.88□□□□□ -0.83
RMD8YFR048W TY2B-OR1Q12113 1770 aa9.88□□□□□ -0.83
RMD8YFR048W TY2B-DR1Q12472 1770 aa9.88□□□□□ -0.83
RMD8YFR048W TY2B-OR2Q12501 1770 aa9.88□□□□□ -0.83
RMD8YFR048W KOG1P38873 1557 aa9.87□□□□□ -0.83
RMD8YFR048W ULS1Q08562 1619 aa9.86□□□□□ -0.83
RMD8YFR048W IFH1P39520 1085 aa9.85□□□□□ -0.83
RMD8YFR048W MDS3P53094 1487 aa9.84□□□□□ -0.83
RMD8YFR048W TY3B-GQ99315 1547 aa9.83□□□□□ -0.84
RMD8YFR048W SPT7P35177 1332 aa9.83□□□□□ -0.84
RMD8YFR048W RTT106P40161 455 aa9.82□□□□□ -0.84
RMD8YFR048W TY2B-BQ12491 1770 aa9.81□□□□□ -0.84
RMD8YFR048W SEC3P33332 1336 aaKnown RBP9.8□□□□□ -0.84
RMD8YFR048W PDR10P51533 1564 aa9.77□□□□□ -0.84
RMD8YFR048W VPS15P22219 1454 aa9.74□□□□□ -0.85
RMD8YFR048W BFR2Q06631 534 aaKnown RBP9.74□□□□□ -0.85
RMD8YFR048W PRS1P32895 427 aaKnown RBP9.72□□□□□ -0.85
RMD8YFR048W SNT2P53127 1403 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-HO13535 1793 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-DR5P0C2I2 1755 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-DR6P0C2I3 1755 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-LR2P0C2I5 1755 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-LR3P0C2I6 1755 aaKnown RBP9.71□□□□□ -0.86
RMD8YFR048W TY1B-PR1P0C2I9 1755 aaKnown RBP9.71□□□□□ -0.86
RMD8YFR048W TY1B-PR2P0C2J0 1756 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-PR3P0C2J1 1755 aaKnown RBP9.71□□□□□ -0.86
RMD8YFR048W TY1B-JR1P47098 1755 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-ML2Q03434 1755 aaKnown RBP9.71□□□□□ -0.86
RMD8YFR048W TY1B-ER1Q03612 1755 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-ML1Q04711 1755 aaKnown RBP9.71□□□□□ -0.86
RMD8YFR048W TY1B-GR2Q12269 1755 aa9.71□□□□□ -0.86
RMD8YFR048W TY1B-OLQ12273 1755 aa9.71□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms