RNA–Protein interactions for RNA: YPR163C

TIF3, Transcript of Translation initiation factor eIF-4B, yeastyeast

Gene TIF3, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIF3YPR163C INO80P53115 1489 aa14.27□□□□□ -0.12
TIF3YPR163C MON2P48563 1636 aaPredicted RBP14.16□□□□□ -0.14
TIF3YPR163C TCB3Q03640 1545 aaKnown RBP13.56□□□□□ -0.24
TIF3YPR163C DNA2P38859 1522 aa13.55□□□□□ -0.24
TIF3YPR163C SWR1Q05471 1514 aa13.55□□□□□ -0.24
TIF3YPR163C SGS1P35187 1447 aa13.44□□□□□ -0.26
TIF3YPR163C TY1B-DR4Q07793 1604 aa13.39□□□□□ -0.27
TIF3YPR163C KOG1P38873 1557 aa13.36□□□□□ -0.27
TIF3YPR163C RSE1Q04693 1361 aaKnown RBP13.13□□□□□ -0.31
TIF3YPR163C SPT6P23615 1451 aaKnown RBP13.03□□□□□ -0.32
TIF3YPR163C HSL1P34244 1518 aa12.99□□□□□ -0.33
TIF3YPR163C SPA2P23201 1466 aaKnown RBP12.97□□□□□ -0.33
TIF3YPR163C SSN2P38931 1420 aa12.81□□□□□ -0.36
TIF3YPR163C ECM5Q03214 1411 aa12.77□□□□□ -0.37
TIF3YPR163C HIR3P47171 1648 aa12.73□□□□□ -0.37
TIF3YPR163C BUD4P47136 1447 aa12.66□□□□□ -0.38
TIF3YPR163C THO2P53552 1597 aaKnown RBP12.6□□□□□ -0.39
TIF3YPR163C MTC1P47018 478 aaKnown RBP12.59□□□□□ -0.39
TIF3YPR163C XRN1P22147 1528 aaKnown RBP12.55□□□□□ -0.4
TIF3YPR163C DRS1P32892 752 aaKnown RBP12.51□□□□□ -0.41
TIF3YPR163C MDS3P53094 1487 aa12.49□□□□□ -0.41
TIF3YPR163C PEP1P32319 1579 aa12.32□□□□□ -0.44
TIF3YPR163C REV3P14284 1504 aa12.29□□□□□ -0.44
TIF3YPR163C ATG2P53855 1592 aa12.25□□□□□ -0.45
TIF3YPR163C TAF2P23255 1407 aa12.23□□□□□ -0.45
TIF3YPR163C SKI3P17883 1432 aaKnown RBP12.21□□□□□ -0.46
TIF3YPR163C BPT1P14772 1559 aa12.18□□□□□ -0.46
TIF3YPR163C SIN3P22579 1536 aa12.11□□□□□ -0.47
TIF3YPR163C SSK2P53599 1579 aa12□□□□□ -0.49
TIF3YPR163C YCF1P39109 1515 aaKnown RBP11.96□□□□□ -0.5
TIF3YPR163C UFD4P33202 1483 aa11.94□□□□□ -0.5
TIF3YPR163C ESP1Q03018 1630 aa11.93□□□□□ -0.5
TIF3YPR163C FAP1P53971 965 aa11.88□□□□□ -0.51
TIF3YPR163C YPK9Q12697 1472 aa11.85□□□□□ -0.51
TIF3YPR163C SCC2Q04002 1493 aa11.83□□□□□ -0.52
TIF3YPR163C MYO2P19524 1574 aaKnown RBP11.82□□□□□ -0.52
TIF3YPR163C RQC2Q12532 1038 aaKnown RBP11.81□□□□□ -0.52
TIF3YPR163C RPO31P04051 1460 aa11.77□□□□□ -0.53
TIF3YPR163C CHD1P32657 1468 aa11.74□□□□□ -0.53
TIF3YPR163C CDC25P04821 1589 aa11.68□□□□□ -0.54
TIF3YPR163C MET5P47169 1442 aa11.67□□□□□ -0.54
TIF3YPR163C MMS22Q06164 1454 aa11.63□□□□□ -0.55
TIF3YPR163C PAN1P32521 1480 aa11.62□□□□□ -0.55
TIF3YPR163C TOP2P06786 1428 aaKnown RBP11.61□□□□□ -0.55
TIF3YPR163C DNF1P32660 1571 aa11.61□□□□□ -0.55
TIF3YPR163C POL1P13382 1468 aa11.58□□□□□ -0.56
TIF3YPR163C TY2B-LR1P0C2J3 1770 aa11.56□□□□□ -0.56
TIF3YPR163C TY2B-FP0CX63 1770 aa11.56□□□□□ -0.56
TIF3YPR163C TY2B-GR2P0CX64 1770 aa11.56□□□□□ -0.56
TIF3YPR163C TY2B-CP25384 1770 aa11.56□□□□□ -0.56
TIF3YPR163C TY2B-DR2Q03494 1770 aa11.56□□□□□ -0.56
TIF3YPR163C TY1B-DR1Q03855 1755 aa11.56□□□□□ -0.56
TIF3YPR163C TY2B-DR3Q07791 1770 aaKnown RBP11.56□□□□□ -0.56
TIF3YPR163C TY2B-OR1Q12113 1770 aa11.56□□□□□ -0.56
TIF3YPR163C TY2B-DR1Q12472 1770 aa11.56□□□□□ -0.56
TIF3YPR163C TY2B-OR2Q12501 1770 aa11.56□□□□□ -0.56
TIF3YPR163C LTE1P07866 1435 aa11.55□□□□□ -0.56
TIF3YPR163C ESC1Q03661 1658 aaKnown RBP11.55□□□□□ -0.56
TIF3YPR163C YTA7P40340 1379 aa11.54□□□□□ -0.56
TIF3YPR163C STU1P38198 1513 aa11.54□□□□□ -0.56
TIF3YPR163C RKR1Q04781 1562 aa11.52□□□□□ -0.57
TIF3YPR163C TY1B-BRQ12193 1756 aa11.5□□□□□ -0.57
TIF3YPR163C TY1B-GR3Q12316 1755 aa11.5□□□□□ -0.57
TIF3YPR163C TY1B-ORQ92393 1755 aa11.5□□□□□ -0.57
TIF3YPR163C TRM732Q03496 1420 aa11.49□□□□□ -0.57
TIF3YPR163C MIF2P35201 549 aa11.47□□□□□ -0.57
TIF3YPR163C RPA190P10964 1664 aaKnown RBP11.44□□□□□ -0.58
TIF3YPR163C SMC4Q12267 1418 aa11.43□□□□□ -0.58
TIF3YPR163C SAS10Q12136 610 aaPredicted RBP11.42□□□□□ -0.58
TIF3YPR163C GEA2P39993 1459 aaKnown RBP11.41□□□□□ -0.58
TIF3YPR163C YOR1P53049 1477 aa11.41□□□□□ -0.58
TIF3YPR163C TY2B-BQ12491 1770 aa11.41□□□□□ -0.58
TIF3YPR163C ITT1Q04638 464 aa11.4□□□□□ -0.58
TIF3YPR163C SPP41P38904 1435 aa11.4□□□□□ -0.58
TIF3YPR163C TY1B-HO13535 1793 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-DR5P0C2I2 1755 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-DR6P0C2I3 1755 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-LR2P0C2I5 1755 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-LR3P0C2I6 1755 aaKnown RBP11.39□□□□□ -0.59
TIF3YPR163C TY1B-PR1P0C2I9 1755 aaKnown RBP11.39□□□□□ -0.59
TIF3YPR163C TY1B-PR2P0C2J0 1756 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-PR3P0C2J1 1755 aaKnown RBP11.39□□□□□ -0.59
TIF3YPR163C TY1B-JR1P47098 1755 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-ML2Q03434 1755 aaKnown RBP11.39□□□□□ -0.59
TIF3YPR163C TY1B-ER1Q03612 1755 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-ML1Q04711 1755 aaKnown RBP11.39□□□□□ -0.59
TIF3YPR163C TY1B-GR2Q12269 1755 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-OLQ12273 1755 aa11.39□□□□□ -0.59
TIF3YPR163C TY1B-PLQ12414 1755 aaKnown RBP11.39□□□□□ -0.59
TIF3YPR163C TY1B-DR3Q99231 1755 aa11.38□□□□□ -0.59
TIF3YPR163C MYO4P32492 1471 aa11.36□□□□□ -0.59
TIF3YPR163C NUP159P40477 1460 aa11.35□□□□□ -0.59
TIF3YPR163C TSC11P40061 1430 aa11.32□□□□□ -0.6
TIF3YPR163C ABP1P15891 592 aaKnown RBP11.32□□□□□ -0.6
TIF3YPR163C TAF7Q05021 590 aa11.32□□□□□ -0.6
TIF3YPR163C DRS2P39524 1355 aa11.3□□□□□ -0.6
TIF3YPR163C BNI1P41832 1953 aa11.29□□□□□ -0.6
TIF3YPR163C VPS15P22219 1454 aa11.27□□□□□ -0.61
TIF3YPR163C MMS1Q06211 1407 aa11.26□□□□□ -0.61
TIF3YPR163C VTH1P40438 1549 aa11.26□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms