RNA–Protein interactions for RNA: YDR418W

RPL12B, Transcript of Ribosomal 60S subunit protein L12B, yeastyeast

Gene RPL12B, Length 498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL12BYDR418W INO80P53115 1489 aa17.75■□□□□ 0.43
RPL12BYDR418W MON2P48563 1636 aaPredicted RBP17.69■□□□□ 0.42
RPL12BYDR418W DNA2P38859 1522 aa16.87■□□□□ 0.29
RPL12BYDR418W SWR1Q05471 1514 aa16.65■□□□□ 0.26
RPL12BYDR418W RSE1Q04693 1361 aaKnown RBP16.62■□□□□ 0.25
RPL12BYDR418W KOG1P38873 1557 aa16.58■□□□□ 0.24
RPL12BYDR418W TCB3Q03640 1545 aaKnown RBP16.29■□□□□ 0.2
RPL12BYDR418W TY1B-DR4Q07793 1604 aa16.26■□□□□ 0.19
RPL12BYDR418W MTC1P47018 478 aaKnown RBP15.72■□□□□ 0.11
RPL12BYDR418W SGS1P35187 1447 aa15.71■□□□□ 0.11
RPL12BYDR418W SPA2P23201 1466 aaKnown RBP15.71■□□□□ 0.1
RPL12BYDR418W SPT6P23615 1451 aaKnown RBP15.65■□□□□ 0.1
RPL12BYDR418W HSL1P34244 1518 aa15.62■□□□□ 0.09
RPL12BYDR418W ECM5Q03214 1411 aa15.53■□□□□ 0.08
RPL12BYDR418W BUD4P47136 1447 aa15.34■□□□□ 0.05
RPL12BYDR418W THO2P53552 1597 aaKnown RBP15.32■□□□□ 0.04
RPL12BYDR418W HIR3P47171 1648 aa15.26■□□□□ 0.03
RPL12BYDR418W MDS3P53094 1487 aa15.23■□□□□ 0.03
RPL12BYDR418W REV3P14284 1504 aa15.07■□□□□ 0
RPL12BYDR418W PEP1P32319 1579 aa14.95□□□□□ -0.02
RPL12BYDR418W XRN1P22147 1528 aaKnown RBP14.94□□□□□ -0.02
RPL12BYDR418W BPT1P14772 1559 aa14.91□□□□□ -0.02
RPL12BYDR418W ATG2P53855 1592 aa14.79□□□□□ -0.04
RPL12BYDR418W MIF2P35201 549 aa14.69□□□□□ -0.06
RPL12BYDR418W YCF1P39109 1515 aaKnown RBP14.62□□□□□ -0.07
RPL12BYDR418W SKI3P17883 1432 aaKnown RBP14.6□□□□□ -0.07
RPL12BYDR418W TAF2P23255 1407 aa14.53□□□□□ -0.08
RPL12BYDR418W SSK2P53599 1579 aa14.49□□□□□ -0.09
RPL12BYDR418W SIN3P22579 1536 aa14.34□□□□□ -0.11
RPL12BYDR418W UFD4P33202 1483 aa14.32□□□□□ -0.12
RPL12BYDR418W MET5P47169 1442 aa14.24□□□□□ -0.13
RPL12BYDR418W ESP1Q03018 1630 aa14.23□□□□□ -0.13
RPL12BYDR418W MYO2P19524 1574 aaKnown RBP14.23□□□□□ -0.13
RPL12BYDR418W LTE1P07866 1435 aa14.21□□□□□ -0.13
RPL12BYDR418W ESC1Q03661 1658 aaKnown RBP14.2□□□□□ -0.14
RPL12BYDR418W RQC2Q12532 1038 aaKnown RBP14.2□□□□□ -0.14
RPL12BYDR418W SSN2P38931 1420 aa14.19□□□□□ -0.14
RPL12BYDR418W YFR006WP43590 535 aa14.17□□□□□ -0.14
RPL12BYDR418W CDC25P04821 1589 aa14.16□□□□□ -0.14
RPL12BYDR418W ABP1P15891 592 aaKnown RBP14.15□□□□□ -0.14
RPL12BYDR418W RPA190P10964 1664 aaKnown RBP14.13□□□□□ -0.15
RPL12BYDR418W CHD1P32657 1468 aa14.12□□□□□ -0.15
RPL12BYDR418W DNF1P32660 1571 aa14.12□□□□□ -0.15
RPL12BYDR418W SCC2Q04002 1493 aa14.09□□□□□ -0.15
RPL12BYDR418W BNI1P41832 1953 aa14.09□□□□□ -0.15
RPL12BYDR418W RKR1Q04781 1562 aa14.05□□□□□ -0.16
RPL12BYDR418W ITT1Q04638 464 aa14.03□□□□□ -0.16
RPL12BYDR418W GEA2P39993 1459 aaKnown RBP14.03□□□□□ -0.16
RPL12BYDR418W YPK9Q12697 1472 aa14.03□□□□□ -0.16
RPL12BYDR418W TY1B-BRQ12193 1756 aa13.97□□□□□ -0.17
RPL12BYDR418W TY1B-GR3Q12316 1755 aa13.97□□□□□ -0.17
RPL12BYDR418W TY1B-ORQ92393 1755 aa13.97□□□□□ -0.17
RPL12BYDR418W RPO31P04051 1460 aa13.97□□□□□ -0.17
RPL12BYDR418W PAN1P32521 1480 aa13.97□□□□□ -0.17
RPL12BYDR418W TY2B-LR1P0C2J3 1770 aa13.96□□□□□ -0.17
RPL12BYDR418W TY2B-FP0CX63 1770 aa13.96□□□□□ -0.17
RPL12BYDR418W TY2B-GR2P0CX64 1770 aa13.96□□□□□ -0.17
RPL12BYDR418W TY2B-CP25384 1770 aa13.96□□□□□ -0.17
RPL12BYDR418W TY2B-DR2Q03494 1770 aa13.96□□□□□ -0.17
RPL12BYDR418W TY1B-DR1Q03855 1755 aa13.96□□□□□ -0.17
RPL12BYDR418W TY2B-DR3Q07791 1770 aaKnown RBP13.96□□□□□ -0.17
RPL12BYDR418W TY2B-OR1Q12113 1770 aa13.96□□□□□ -0.17
RPL12BYDR418W TY2B-DR1Q12472 1770 aa13.96□□□□□ -0.17
RPL12BYDR418W TY2B-OR2Q12501 1770 aa13.96□□□□□ -0.17
RPL12BYDR418W MMS1Q06211 1407 aa13.92□□□□□ -0.18
RPL12BYDR418W DRS1P32892 752 aaKnown RBP13.82□□□□□ -0.2
RPL12BYDR418W TRM732Q03496 1420 aa13.79□□□□□ -0.2
RPL12BYDR418W DRS2P39524 1355 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-HO13535 1793 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-DR5P0C2I2 1755 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-DR6P0C2I3 1755 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-LR2P0C2I5 1755 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-LR3P0C2I6 1755 aaKnown RBP13.78□□□□□ -0.2
RPL12BYDR418W TY1B-PR1P0C2I9 1755 aaKnown RBP13.78□□□□□ -0.2
RPL12BYDR418W TY1B-PR2P0C2J0 1756 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-PR3P0C2J1 1755 aaKnown RBP13.78□□□□□ -0.2
RPL12BYDR418W TY1B-JR1P47098 1755 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-ML2Q03434 1755 aaKnown RBP13.78□□□□□ -0.2
RPL12BYDR418W TY1B-ER1Q03612 1755 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-ML1Q04711 1755 aaKnown RBP13.78□□□□□ -0.2
RPL12BYDR418W TY1B-GR2Q12269 1755 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-OLQ12273 1755 aa13.78□□□□□ -0.2
RPL12BYDR418W TY1B-PLQ12414 1755 aaKnown RBP13.78□□□□□ -0.2
RPL12BYDR418W TY2B-BQ12491 1770 aa13.77□□□□□ -0.21
RPL12BYDR418W IRC20Q06554 1556 aa13.74□□□□□ -0.21
RPL12BYDR418W MMS22Q06164 1454 aa13.74□□□□□ -0.21
RPL12BYDR418W TOP2P06786 1428 aaKnown RBP13.72□□□□□ -0.21
RPL12BYDR418W YRF1-1P0CX20 1796 aa13.68□□□□□ -0.22
RPL12BYDR418W YRF1-5P0CX21 1796 aa13.68□□□□□ -0.22
RPL12BYDR418W YRF1-8P0CX22 1796 aa13.68□□□□□ -0.22
RPL12BYDR418W TY1B-DR3Q99231 1755 aa13.68□□□□□ -0.22
RPL12BYDR418W VPS15P22219 1454 aa13.67□□□□□ -0.22
RPL12BYDR418W NUP159P40477 1460 aa13.65□□□□□ -0.22
RPL12BYDR418W DNF2Q12675 1612 aa13.58□□□□□ -0.24
RPL12BYDR418W NTE1Q04958 1679 aa13.52□□□□□ -0.25
RPL12BYDR418W SPP41P38904 1435 aa13.49□□□□□ -0.25
RPL12BYDR418W TY1B-JR2P47100 1755 aaKnown RBP13.48□□□□□ -0.25
RPL12BYDR418W TY1B-ER2Q03619 1755 aa13.48□□□□□ -0.25
RPL12BYDR418W TY1B-MR1Q04214 1755 aa13.48□□□□□ -0.25
RPL12BYDR418W TY1B-MR2Q04670 1755 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 1093.7 ms