Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.84■■□□□ 1.89
PCK1P35558 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCK1P35558 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCK1P35558 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCK1P35558 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.83■■□□□ 1.89
PCK1P35558 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCK1P35558 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCK1P35558 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.82■■□□□ 1.88
PCK1P35558 AC044849.2-201ENST00000606596 710 ntBASIC26.82■■□□□ 1.88
PCK1P35558 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCK1P35558 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCK1P35558 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.82■■□□□ 1.88
PCK1P35558 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCK1P35558 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
PCK1P35558 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
PCK1P35558 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.81■■□□□ 1.88
PCK1P35558 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
PCK1P35558 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.8■■□□□ 1.88
PCK1P35558 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCK1P35558 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.8■■□□□ 1.88
PCK1P35558 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCK1P35558 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCK1P35558 AC135983.2-203ENST00000454486 1613 ntBASIC26.79■■□□□ 1.88
PCK1P35558 LINC00273-201ENST00000539813 1452 ntBASIC26.78■■□□□ 1.88
PCK1P35558 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCK1P35558 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCK1P35558 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCK1P35558 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
PCK1P35558 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
PCK1P35558 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
PCK1P35558 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.76■■□□□ 1.87
PCK1P35558 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.76■■□□□ 1.87
PCK1P35558 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCK1P35558 AC100797.4-201ENST00000631653 1827 ntBASIC26.76■■□□□ 1.87
PCK1P35558 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCK1P35558 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCK1P35558 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.75■■□□□ 1.87
PCK1P35558 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
PCK1P35558 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCK1P35558 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCK1P35558 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCK1P35558 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
PCK1P35558 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCK1P35558 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCK1P35558 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.74■■□□□ 1.87
PCK1P35558 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
PCK1P35558 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.74■■□□□ 1.87
PCK1P35558 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.74■■□□□ 1.87
PCK1P35558 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCK1P35558 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCK1P35558 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.73■■□□□ 1.87
PCK1P35558 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCK1P35558 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCK1P35558 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.73■■□□□ 1.87
PCK1P35558 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.72■■□□□ 1.87
PCK1P35558 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.72■■□□□ 1.87
PCK1P35558 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.72■■□□□ 1.87
PCK1P35558 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCK1P35558 WHAMMP2-203ENST00000563942 1603 ntBASIC26.71■■□□□ 1.87
PCK1P35558 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCK1P35558 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCK1P35558 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCK1P35558 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCK1P35558 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCK1P35558 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.7■■□□□ 1.86
PCK1P35558 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCK1P35558 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCK1P35558 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.69■■□□□ 1.86
PCK1P35558 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.68■■□□□ 1.86
PCK1P35558 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.67■■□□□ 1.86
PCK1P35558 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCK1P35558 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
PCK1P35558 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
PCK1P35558 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
PCK1P35558 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCK1P35558 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCK1P35558 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCK1P35558 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCK1P35558 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.66■■□□□ 1.86
PCK1P35558 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
PCK1P35558 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCK1P35558 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.64■■□□□ 1.86
PCK1P35558 RPS2P35-201ENST00000443417 897 ntBASIC26.63■■□□□ 1.85
PCK1P35558 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.63■■□□□ 1.85
PCK1P35558 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.63■■□□□ 1.85
PCK1P35558 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCK1P35558 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.62■■□□□ 1.85
PCK1P35558 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCK1P35558 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCK1P35558 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.62■■□□□ 1.85
PCK1P35558 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
PCK1P35558 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.62■■□□□ 1.85
PCK1P35558 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.62■■□□□ 1.85
PCK1P35558 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
PCK1P35558 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
PCK1P35558 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCK1P35558 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.61■■□□□ 1.85
PCK1P35558 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCK1P35558 AP002414.2-202ENST00000590929 1450 ntBASIC26.61■■□□□ 1.85
PCK1P35558 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms