Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PDGFAP04085 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDGFAP04085 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDGFAP04085 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
PDGFAP04085 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDGFAP04085 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.92■■□□□ 1.42
PDGFAP04085 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
PDGFAP04085 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDGFAP04085 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDGFAP04085 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDGFAP04085 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PDGFAP04085 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDGFAP04085 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
PDGFAP04085 AC010864.1-201ENST00000609407 1511 ntBASIC23.9■■□□□ 1.42
PDGFAP04085 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PDGFAP04085 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDGFAP04085 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.9■■□□□ 1.42
PDGFAP04085 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.9■■□□□ 1.42
PDGFAP04085 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDGFAP04085 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDGFAP04085 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDGFAP04085 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDGFAP04085 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDGFAP04085 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.88■■□□□ 1.41
PDGFAP04085 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PDGFAP04085 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDGFAP04085 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.87■■□□□ 1.41
PDGFAP04085 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
PDGFAP04085 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDGFAP04085 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDGFAP04085 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDGFAP04085 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PDGFAP04085 AC022413.1-201ENST00000624602 984 ntBASIC23.85■■□□□ 1.41
PDGFAP04085 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PDGFAP04085 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PDGFAP04085 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDGFAP04085 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PDGFAP04085 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDGFAP04085 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PDGFAP04085 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PDGFAP04085 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.82■■□□□ 1.4
PDGFAP04085 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.82■■□□□ 1.4
PDGFAP04085 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFAP04085 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.82■■□□□ 1.4
PDGFAP04085 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PDGFAP04085 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.81■■□□□ 1.4
PDGFAP04085 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PDGFAP04085 NTF6A-201ENST00000591175 560 ntBASIC23.81■■□□□ 1.4
PDGFAP04085 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PDGFAP04085 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.8■■□□□ 1.4
PDGFAP04085 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFAP04085 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.8■■□□□ 1.4
PDGFAP04085 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PDGFAP04085 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PDGFAP04085 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PDGFAP04085 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
PDGFAP04085 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFAP04085 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFAP04085 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PDGFAP04085 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFAP04085 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PDGFAP04085 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFAP04085 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFAP04085 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFAP04085 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.76■■□□□ 1.39
PDGFAP04085 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFAP04085 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PDGFAP04085 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFAP04085 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFAP04085 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PDGFAP04085 AC012354.3-201ENST00000623734 483 ntBASIC23.75■■□□□ 1.39
PDGFAP04085 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDGFAP04085 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PDGFAP04085 WHAMMP2-203ENST00000563942 1603 ntBASIC23.73■■□□□ 1.39
PDGFAP04085 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PDGFAP04085 AC008813.1-201ENST00000536597 885 ntBASIC23.73■■□□□ 1.39
PDGFAP04085 AC127502.1-201ENST00000399971 1502 ntBASIC23.73■■□□□ 1.39
PDGFAP04085 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFAP04085 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFAP04085 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PDGFAP04085 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFAP04085 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PDGFAP04085 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFAP04085 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PDGFAP04085 AC135983.2-203ENST00000454486 1613 ntBASIC23.7■■□□□ 1.39
PDGFAP04085 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDGFAP04085 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.7■■□□□ 1.38
PDGFAP04085 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.7■■□□□ 1.38
PDGFAP04085 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PDGFAP04085 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
PDGFAP04085 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDGFAP04085 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PDGFAP04085 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.69■■□□□ 1.38
PDGFAP04085 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PDGFAP04085 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.68■■□□□ 1.38
PDGFAP04085 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PDGFAP04085 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFAP04085 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.67■■□□□ 1.38
PDGFAP04085 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PDGFAP04085 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms