Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
TBC1D4O60343 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TBC1D4O60343 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TBC1D4O60343 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TBC1D4O60343 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TBC1D4O60343 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TBC1D4O60343 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TBC1D4O60343 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TBC1D4O60343 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
TBC1D4O60343 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TBC1D4O60343 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.36■■□□□ 1.97
TBC1D4O60343 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TBC1D4O60343 ST7-AS1-201ENST00000456775 1889 ntBASIC27.36■■□□□ 1.97
TBC1D4O60343 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TBC1D4O60343 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TBC1D4O60343 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
TBC1D4O60343 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TBC1D4O60343 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TBC1D4O60343 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
TBC1D4O60343 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TBC1D4O60343 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TBC1D4O60343 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
TBC1D4O60343 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.32■■□□□ 1.96
TBC1D4O60343 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.32■■□□□ 1.96
TBC1D4O60343 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TBC1D4O60343 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TBC1D4O60343 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.31■■□□□ 1.96
TBC1D4O60343 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
TBC1D4O60343 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TBC1D4O60343 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.3■■□□□ 1.96
TBC1D4O60343 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.29■■□□□ 1.96
TBC1D4O60343 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.29■■□□□ 1.96
TBC1D4O60343 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.29■■□□□ 1.96
TBC1D4O60343 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
TBC1D4O60343 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TBC1D4O60343 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.28■■□□□ 1.96
TBC1D4O60343 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TBC1D4O60343 AC008813.1-201ENST00000536597 885 ntBASIC27.28■■□□□ 1.96
TBC1D4O60343 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TBC1D4O60343 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TBC1D4O60343 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
TBC1D4O60343 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TBC1D4O60343 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
TBC1D4O60343 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TBC1D4O60343 AC110285.7-201ENST00000624417 1536 ntBASIC27.26■■□□□ 1.96
TBC1D4O60343 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
TBC1D4O60343 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TBC1D4O60343 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TBC1D4O60343 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TBC1D4O60343 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
TBC1D4O60343 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.24■■□□□ 1.95
TBC1D4O60343 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TBC1D4O60343 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.23■■□□□ 1.95
TBC1D4O60343 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TBC1D4O60343 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
TBC1D4O60343 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.23■■□□□ 1.95
TBC1D4O60343 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.23■■□□□ 1.95
TBC1D4O60343 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
TBC1D4O60343 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TBC1D4O60343 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TBC1D4O60343 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.22■■□□□ 1.95
TBC1D4O60343 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TBC1D4O60343 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.21■■□□□ 1.95
TBC1D4O60343 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
TBC1D4O60343 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TBC1D4O60343 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.2■■□□□ 1.94
TBC1D4O60343 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.2■■□□□ 1.94
TBC1D4O60343 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TBC1D4O60343 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TBC1D4O60343 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.19■■□□□ 1.94
TBC1D4O60343 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.19■■□□□ 1.94
TBC1D4O60343 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TBC1D4O60343 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TBC1D4O60343 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
TBC1D4O60343 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TBC1D4O60343 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TBC1D4O60343 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TBC1D4O60343 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TBC1D4O60343 GPX1-201ENST00000419349 1106 ntBASIC27.17■■□□□ 1.94
TBC1D4O60343 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.17■■□□□ 1.94
TBC1D4O60343 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.17■■□□□ 1.94
TBC1D4O60343 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
TBC1D4O60343 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
TBC1D4O60343 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TBC1D4O60343 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TBC1D4O60343 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TBC1D4O60343 AP004833.2-201ENST00000532228 1454 ntBASIC27.15■■□□□ 1.94
TBC1D4O60343 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
TBC1D4O60343 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.15■■□□□ 1.94
TBC1D4O60343 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
TBC1D4O60343 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.14■■□□□ 1.94
TBC1D4O60343 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TBC1D4O60343 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TBC1D4O60343 AC148477.6-201ENST00000623746 465 ntBASIC27.14■■□□□ 1.94
TBC1D4O60343 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
TBC1D4O60343 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
TBC1D4O60343 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TBC1D4O60343 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.13■■□□□ 1.93
TBC1D4O60343 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TBC1D4O60343 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms