Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA12O60330 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
PCDHGA12O60330 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA12O60330 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA12O60330 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA12O60330 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA12O60330 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA12O60330 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA12O60330 AL161658.1-201ENST00000623641 1967 ntBASIC25.49■■□□□ 1.67
PCDHGA12O60330 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.48■■□□□ 1.67
PCDHGA12O60330 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA12O60330 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA12O60330 AC010864.1-201ENST00000609407 1511 ntBASIC25.46■■□□□ 1.67
PCDHGA12O60330 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA12O60330 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
PCDHGA12O60330 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHGA12O60330 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PCDHGA12O60330 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PCDHGA12O60330 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
PCDHGA12O60330 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGA12O60330 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA12O60330 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA12O60330 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA12O60330 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA12O60330 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.43■■□□□ 1.66
PCDHGA12O60330 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA12O60330 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
PCDHGA12O60330 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
PCDHGA12O60330 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA12O60330 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA12O60330 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHGA12O60330 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHGA12O60330 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA12O60330 ABCB10P1-201ENST00000614297 2181 ntBASIC25.4■■□□□ 1.66
PCDHGA12O60330 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHGA12O60330 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
PCDHGA12O60330 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGA12O60330 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGA12O60330 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGA12O60330 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
PCDHGA12O60330 AC008813.1-201ENST00000536597 885 ntBASIC25.39■■□□□ 1.66
PCDHGA12O60330 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.39■■□□□ 1.66
PCDHGA12O60330 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHGA12O60330 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
PCDHGA12O60330 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHGA12O60330 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGA12O60330 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGA12O60330 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA12O60330 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
PCDHGA12O60330 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHGA12O60330 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGA12O60330 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHGA12O60330 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PCDHGA12O60330 AC022413.1-201ENST00000624602 984 ntBASIC25.35■■□□□ 1.65
PCDHGA12O60330 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGA12O60330 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGA12O60330 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.35■■□□□ 1.65
PCDHGA12O60330 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA12O60330 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA12O60330 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA12O60330 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA12O60330 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.32■■□□□ 1.64
PCDHGA12O60330 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA12O60330 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA12O60330 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA12O60330 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA12O60330 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA12O60330 NTF6A-201ENST00000591175 560 ntBASIC25.3■■□□□ 1.64
PCDHGA12O60330 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGA12O60330 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGA12O60330 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHGA12O60330 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGA12O60330 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGA12O60330 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
PCDHGA12O60330 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGA12O60330 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA12O60330 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA12O60330 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA12O60330 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.25■■□□□ 1.63
PCDHGA12O60330 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.25■■□□□ 1.63
PCDHGA12O60330 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
PCDHGA12O60330 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHGA12O60330 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA12O60330 AC135983.2-203ENST00000454486 1613 ntBASIC25.24■■□□□ 1.63
PCDHGA12O60330 AC012354.3-201ENST00000623734 483 ntBASIC25.24■■□□□ 1.63
PCDHGA12O60330 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHGA12O60330 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.23■■□□□ 1.63
PCDHGA12O60330 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHGA12O60330 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA12O60330 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGA12O60330 ABCB10P3-201ENST00000561950 2166 ntBASIC25.22■■□□□ 1.63
PCDHGA12O60330 AC127502.1-201ENST00000399971 1502 ntBASIC25.22■■□□□ 1.63
PCDHGA12O60330 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDHGA12O60330 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PCDHGA12O60330 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PCDHGA12O60330 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHGA12O60330 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA12O60330 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHGA12O60330 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHGA12O60330 WHAMMP2-203ENST00000563942 1603 ntBASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms