Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.82■■□□□ 1.08
SSNA1O43805 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.82■■□□□ 1.08
SSNA1O43805 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.81■■□□□ 1.08
SSNA1O43805 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.81■■□□□ 1.08
SSNA1O43805 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.81■■□□□ 1.08
SSNA1O43805 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SSNA1O43805 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSNA1O43805 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SSNA1O43805 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSNA1O43805 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SSNA1O43805 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SSNA1O43805 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SSNA1O43805 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SSNA1O43805 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SSNA1O43805 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SSNA1O43805 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SSNA1O43805 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SSNA1O43805 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
SSNA1O43805 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SSNA1O43805 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SSNA1O43805 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SSNA1O43805 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
SSNA1O43805 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SSNA1O43805 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SSNA1O43805 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.76■■□□□ 1.07
SSNA1O43805 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSNA1O43805 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.75■■□□□ 1.07
SSNA1O43805 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SSNA1O43805 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSNA1O43805 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SSNA1O43805 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SSNA1O43805 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.75■■□□□ 1.07
SSNA1O43805 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSNA1O43805 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SSNA1O43805 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SSNA1O43805 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SSNA1O43805 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.74■■□□□ 1.07
SSNA1O43805 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSNA1O43805 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SSNA1O43805 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.73■■□□□ 1.07
SSNA1O43805 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SSNA1O43805 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SSNA1O43805 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SSNA1O43805 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.72■■□□□ 1.07
SSNA1O43805 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.72■■□□□ 1.07
SSNA1O43805 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SSNA1O43805 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSNA1O43805 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSNA1O43805 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SSNA1O43805 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.71■■□□□ 1.07
SSNA1O43805 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SSNA1O43805 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SSNA1O43805 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSNA1O43805 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSNA1O43805 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSNA1O43805 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.69■■□□□ 1.06
SSNA1O43805 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC21.69■■□□□ 1.06
SSNA1O43805 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSNA1O43805 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSNA1O43805 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSNA1O43805 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SSNA1O43805 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.68■■□□□ 1.06
SSNA1O43805 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.67■■□□□ 1.06
SSNA1O43805 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSNA1O43805 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSNA1O43805 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSNA1O43805 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.66■■□□□ 1.06
SSNA1O43805 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SSNA1O43805 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SSNA1O43805 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSNA1O43805 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSNA1O43805 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSNA1O43805 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSNA1O43805 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSNA1O43805 AC020928.2-201ENST00000588717 2197 ntBASIC21.65■■□□□ 1.06
SSNA1O43805 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
SSNA1O43805 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.64■■□□□ 1.06
SSNA1O43805 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SSNA1O43805 AC091060.1-201ENST00000623524 1766 ntBASIC21.64■■□□□ 1.06
SSNA1O43805 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.64■■□□□ 1.06
SSNA1O43805 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSNA1O43805 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.64■■□□□ 1.05
SSNA1O43805 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSNA1O43805 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSNA1O43805 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSNA1O43805 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSNA1O43805 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SSNA1O43805 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.63■■□□□ 1.05
SSNA1O43805 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SSNA1O43805 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SSNA1O43805 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.61■■□□□ 1.05
SSNA1O43805 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SSNA1O43805 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.6■■□□□ 1.05
SSNA1O43805 AC093323.1-202ENST00000635031 2045 ntBASIC21.6■■□□□ 1.05
SSNA1O43805 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSNA1O43805 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SSNA1O43805 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SSNA1O43805 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSNA1O43805 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SSNA1O43805 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms