Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
NPC1O15118 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.2■■□□□ 1.78
NPC1O15118 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
NPC1O15118 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
NPC1O15118 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.19■■□□□ 1.78
NPC1O15118 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
NPC1O15118 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NPC1O15118 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NPC1O15118 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
NPC1O15118 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NPC1O15118 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
NPC1O15118 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NPC1O15118 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
NPC1O15118 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.16■■□□□ 1.78
NPC1O15118 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.16■■□□□ 1.78
NPC1O15118 WHAMMP2-203ENST00000563942 1603 ntBASIC26.16■■□□□ 1.78
NPC1O15118 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
NPC1O15118 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.15■■□□□ 1.78
NPC1O15118 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NPC1O15118 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
NPC1O15118 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NPC1O15118 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.13■■□□□ 1.77
NPC1O15118 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NPC1O15118 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NPC1O15118 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.11■■□□□ 1.77
NPC1O15118 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NPC1O15118 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.11■■□□□ 1.77
NPC1O15118 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPC1O15118 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.1■■□□□ 1.77
NPC1O15118 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
NPC1O15118 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NPC1O15118 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPC1O15118 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPC1O15118 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPC1O15118 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.08■■□□□ 1.77
NPC1O15118 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
NPC1O15118 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.07■■□□□ 1.76
NPC1O15118 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NPC1O15118 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
NPC1O15118 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
NPC1O15118 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NPC1O15118 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
NPC1O15118 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
NPC1O15118 GPX1-201ENST00000419349 1106 ntBASIC26.04■■□□□ 1.76
NPC1O15118 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.04■■□□□ 1.76
NPC1O15118 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
NPC1O15118 AC110285.7-201ENST00000624417 1536 ntBASIC26.04■■□□□ 1.76
NPC1O15118 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
NPC1O15118 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NPC1O15118 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
NPC1O15118 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.03■■□□□ 1.76
NPC1O15118 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.02■■□□□ 1.76
NPC1O15118 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NPC1O15118 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
NPC1O15118 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
NPC1O15118 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
NPC1O15118 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26■■□□□ 1.75
NPC1O15118 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
NPC1O15118 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NPC1O15118 RNF126P1-201ENST00000567452 1320 ntBASIC26■■□□□ 1.75
NPC1O15118 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NPC1O15118 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NPC1O15118 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
NPC1O15118 RARRES2P2-201ENST00000394842 485 ntBASIC26■■□□□ 1.75
NPC1O15118 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
NPC1O15118 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26■■□□□ 1.75
NPC1O15118 AC148477.6-201ENST00000623746 465 ntBASIC26■■□□□ 1.75
NPC1O15118 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.99■■□□□ 1.75
NPC1O15118 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.99■■□□□ 1.75
NPC1O15118 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
NPC1O15118 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPC1O15118 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NPC1O15118 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPC1O15118 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NPC1O15118 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.98■■□□□ 1.75
NPC1O15118 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.98■■□□□ 1.75
NPC1O15118 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.98■■□□□ 1.75
NPC1O15118 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPC1O15118 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
NPC1O15118 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
NPC1O15118 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NPC1O15118 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.97■■□□□ 1.75
NPC1O15118 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NPC1O15118 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.97■■□□□ 1.75
NPC1O15118 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPC1O15118 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NPC1O15118 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.96■■□□□ 1.75
NPC1O15118 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
NPC1O15118 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.95■■□□□ 1.75
NPC1O15118 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NPC1O15118 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
NPC1O15118 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.95■■□□□ 1.74
NPC1O15118 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.95■■□□□ 1.74
NPC1O15118 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
NPC1O15118 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.95■■□□□ 1.74
NPC1O15118 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.94■■□□□ 1.74
NPC1O15118 AP004833.2-201ENST00000532228 1454 ntBASIC25.94■■□□□ 1.74
NPC1O15118 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
NPC1O15118 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NPC1O15118 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms