Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SYN3O14994 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SYN3O14994 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
SYN3O14994 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.46■■□□□ 1.99
SYN3O14994 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SYN3O14994 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SYN3O14994 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.45■■□□□ 1.98
SYN3O14994 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SYN3O14994 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.45■■□□□ 1.98
SYN3O14994 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
SYN3O14994 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.44■■□□□ 1.98
SYN3O14994 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.44■■□□□ 1.98
SYN3O14994 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.44■■□□□ 1.98
SYN3O14994 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
SYN3O14994 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SYN3O14994 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.43■■□□□ 1.98
SYN3O14994 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SYN3O14994 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.42■■□□□ 1.98
SYN3O14994 AC008813.1-201ENST00000536597 885 ntBASIC27.42■■□□□ 1.98
SYN3O14994 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.42■■□□□ 1.98
SYN3O14994 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
SYN3O14994 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
SYN3O14994 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SYN3O14994 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SYN3O14994 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SYN3O14994 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SYN3O14994 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SYN3O14994 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.39■■□□□ 1.98
SYN3O14994 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.39■■□□□ 1.98
SYN3O14994 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
SYN3O14994 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SYN3O14994 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.38■■□□□ 1.97
SYN3O14994 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.38■■□□□ 1.97
SYN3O14994 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SYN3O14994 AC110285.7-201ENST00000624417 1536 ntBASIC27.37■■□□□ 1.97
SYN3O14994 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SYN3O14994 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.36■■□□□ 1.97
SYN3O14994 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
SYN3O14994 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
SYN3O14994 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SYN3O14994 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SYN3O14994 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.36■■□□□ 1.97
SYN3O14994 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
SYN3O14994 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SYN3O14994 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SYN3O14994 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SYN3O14994 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.34■■□□□ 1.97
SYN3O14994 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SYN3O14994 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.33■■□□□ 1.97
SYN3O14994 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SYN3O14994 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.33■■□□□ 1.97
SYN3O14994 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
SYN3O14994 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
SYN3O14994 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.32■■□□□ 1.96
SYN3O14994 AP004833.2-201ENST00000532228 1454 ntBASIC27.32■■□□□ 1.96
SYN3O14994 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SYN3O14994 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.31■■□□□ 1.96
SYN3O14994 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SYN3O14994 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SYN3O14994 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SYN3O14994 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SYN3O14994 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SYN3O14994 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SYN3O14994 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SYN3O14994 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYN3O14994 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.29■■□□□ 1.96
SYN3O14994 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYN3O14994 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYN3O14994 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYN3O14994 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SYN3O14994 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYN3O14994 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYN3O14994 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SYN3O14994 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SYN3O14994 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SYN3O14994 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.27■■□□□ 1.96
SYN3O14994 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.27■■□□□ 1.96
SYN3O14994 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SYN3O14994 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SYN3O14994 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
SYN3O14994 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SYN3O14994 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SYN3O14994 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.25■■□□□ 1.95
SYN3O14994 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SYN3O14994 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SYN3O14994 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.24■■□□□ 1.95
SYN3O14994 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.24■■□□□ 1.95
SYN3O14994 AC148477.6-201ENST00000623746 465 ntBASIC27.24■■□□□ 1.95
SYN3O14994 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SYN3O14994 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.23■■□□□ 1.95
SYN3O14994 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SYN3O14994 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SYN3O14994 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
SYN3O14994 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SYN3O14994 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SYN3O14994 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SYN3O14994 GPX1-201ENST00000419349 1106 ntBASIC27.22■■□□□ 1.95
SYN3O14994 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.22■■□□□ 1.95
SYN3O14994 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SYN3O14994 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms