Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 DUX4L15-201ENST00000611059 1267 ntBASIC27.29■■□□□ 1.96
CLDN5O00501 DUX4L23-201ENST00000615195 1269 ntBASIC27.29■■□□□ 1.96
CLDN5O00501 DUX4L24-201ENST00000617576 1269 ntBASIC27.29■■□□□ 1.96
CLDN5O00501 DUX4L22-201ENST00000618238 1269 ntBASIC27.29■■□□□ 1.96
CLDN5O00501 DUX4L20-201ENST00000619712 1269 ntBASIC27.29■■□□□ 1.96
CLDN5O00501 DUX4L21-201ENST00000622058 1269 ntBASIC27.29■■□□□ 1.96
CLDN5O00501 DUX4L10-201ENST00000622460 1267 ntBASIC27.29■■□□□ 1.96
CLDN5O00501 DUX4L25-201ENST00000624915 1269 ntBASIC27.29■■□□□ 1.96
CLDN5O00501 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CLDN5O00501 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CLDN5O00501 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CLDN5O00501 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CLDN5O00501 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CLDN5O00501 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CLDN5O00501 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CLDN5O00501 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
CLDN5O00501 AL139393.2-201ENST00000608721 2025 ntBASIC27.27■■□□□ 1.96
CLDN5O00501 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CLDN5O00501 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CLDN5O00501 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
CLDN5O00501 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.26■■□□□ 1.95
CLDN5O00501 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.26■■□□□ 1.95
CLDN5O00501 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.26■■□□□ 1.95
CLDN5O00501 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.26■■□□□ 1.95
CLDN5O00501 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
CLDN5O00501 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.25■■□□□ 1.95
CLDN5O00501 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CLDN5O00501 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CLDN5O00501 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CLDN5O00501 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CLDN5O00501 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CLDN5O00501 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
CLDN5O00501 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.21■■□□□ 1.95
CLDN5O00501 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CLDN5O00501 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CLDN5O00501 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CLDN5O00501 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
CLDN5O00501 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.2■■□□□ 1.94
CLDN5O00501 AC139426.1-201ENST00000568218 2529 ntBASIC27.19■■□□□ 1.94
CLDN5O00501 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.19■■□□□ 1.94
CLDN5O00501 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CLDN5O00501 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.17■■□□□ 1.94
CLDN5O00501 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CLDN5O00501 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
CLDN5O00501 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CLDN5O00501 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.17■■□□□ 1.94
CLDN5O00501 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CLDN5O00501 MIR639-201ENST00000384974 98 ntBASIC27.16■■□□□ 1.94
CLDN5O00501 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.16■■□□□ 1.94
CLDN5O00501 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.16■■□□□ 1.94
CLDN5O00501 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CLDN5O00501 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CLDN5O00501 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.15■■□□□ 1.94
CLDN5O00501 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.15■■□□□ 1.94
CLDN5O00501 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CLDN5O00501 AP004833.2-201ENST00000532228 1454 ntBASIC27.14■■□□□ 1.94
CLDN5O00501 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
CLDN5O00501 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
CLDN5O00501 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CLDN5O00501 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CLDN5O00501 AC100797.4-201ENST00000631653 1827 ntBASIC27.13■■□□□ 1.93
CLDN5O00501 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLDN5O00501 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLDN5O00501 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLDN5O00501 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CLDN5O00501 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CLDN5O00501 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CLDN5O00501 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CLDN5O00501 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.12■■□□□ 1.93
CLDN5O00501 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CLDN5O00501 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.12■■□□□ 1.93
CLDN5O00501 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.12■■□□□ 1.93
CLDN5O00501 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLDN5O00501 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CLDN5O00501 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.11■■□□□ 1.93
CLDN5O00501 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLDN5O00501 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLDN5O00501 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.11■■□□□ 1.93
CLDN5O00501 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CLDN5O00501 ABCB10P3-201ENST00000561950 2166 ntBASIC27.11■■□□□ 1.93
CLDN5O00501 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.1■■□□□ 1.93
CLDN5O00501 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CLDN5O00501 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.1■■□□□ 1.93
CLDN5O00501 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.09■■□□□ 1.93
CLDN5O00501 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.09■■□□□ 1.93
CLDN5O00501 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.09■■□□□ 1.93
CLDN5O00501 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CLDN5O00501 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.08■■□□□ 1.93
CLDN5O00501 AC110285.7-201ENST00000624417 1536 ntBASIC27.08■■□□□ 1.93
CLDN5O00501 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLDN5O00501 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLDN5O00501 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CLDN5O00501 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.07■■□□□ 1.92
CLDN5O00501 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CLDN5O00501 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
CLDN5O00501 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
CLDN5O00501 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CLDN5O00501 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CLDN5O00501 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CLDN5O00501 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms