Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.96■■■□□ 2.55
CLRN2A0PK11 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.95■■■□□ 2.55
CLRN2A0PK11 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CLRN2A0PK11 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.54
CLRN2A0PK11 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLRN2A0PK11 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CLRN2A0PK11 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.94■■■□□ 2.54
CLRN2A0PK11 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CLRN2A0PK11 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CLRN2A0PK11 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.93■■■□□ 2.54
CLRN2A0PK11 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CLRN2A0PK11 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLRN2A0PK11 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.92■■■□□ 2.54
CLRN2A0PK11 AC008813.1-201ENST00000536597 885 ntBASIC30.92■■■□□ 2.54
CLRN2A0PK11 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLRN2A0PK11 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLRN2A0PK11 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CLRN2A0PK11 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CLRN2A0PK11 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.9■■■□□ 2.54
CLRN2A0PK11 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CLRN2A0PK11 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.88■■■□□ 2.53
CLRN2A0PK11 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLRN2A0PK11 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
CLRN2A0PK11 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLRN2A0PK11 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLRN2A0PK11 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
CLRN2A0PK11 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CLRN2A0PK11 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
CLRN2A0PK11 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLRN2A0PK11 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLRN2A0PK11 NTF6A-201ENST00000591175 560 ntBASIC30.85■■■□□ 2.53
CLRN2A0PK11 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CLRN2A0PK11 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.84■■■□□ 2.53
CLRN2A0PK11 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CLRN2A0PK11 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CLRN2A0PK11 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.84■■■□□ 2.53
CLRN2A0PK11 AC110285.7-201ENST00000624417 1536 ntBASIC30.83■■■□□ 2.53
CLRN2A0PK11 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.82■■■□□ 2.52
CLRN2A0PK11 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
CLRN2A0PK11 AL135925.1-201ENST00000605920 1701 ntBASIC30.81■■■□□ 2.52
CLRN2A0PK11 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CLRN2A0PK11 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
CLRN2A0PK11 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CLRN2A0PK11 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.79■■■□□ 2.52
CLRN2A0PK11 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
CLRN2A0PK11 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CLRN2A0PK11 AC012354.3-201ENST00000623734 483 ntBASIC30.77■■■□□ 2.52
CLRN2A0PK11 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.77■■■□□ 2.52
CLRN2A0PK11 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.76■■■□□ 2.51
CLRN2A0PK11 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CLRN2A0PK11 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
CLRN2A0PK11 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CLRN2A0PK11 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CLRN2A0PK11 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
CLRN2A0PK11 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CLRN2A0PK11 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CLRN2A0PK11 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
CLRN2A0PK11 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CLRN2A0PK11 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CLRN2A0PK11 AC060814.1-201ENST00000554326 538 ntBASIC30.72■■■□□ 2.51
CLRN2A0PK11 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
CLRN2A0PK11 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CLRN2A0PK11 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CLRN2A0PK11 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CLRN2A0PK11 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CLRN2A0PK11 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CLRN2A0PK11 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
CLRN2A0PK11 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CLRN2A0PK11 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CLRN2A0PK11 AC148477.6-201ENST00000623746 465 ntBASIC30.69■■■□□ 2.5
CLRN2A0PK11 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
CLRN2A0PK11 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLRN2A0PK11 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CLRN2A0PK11 U85056.1-201ENST00000616429 682 ntBASIC30.67■■■□□ 2.5
CLRN2A0PK11 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.67■■■□□ 2.5
CLRN2A0PK11 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.66■■■□□ 2.5
CLRN2A0PK11 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CLRN2A0PK11 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.65■■■□□ 2.5
CLRN2A0PK11 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.65■■■□□ 2.5
CLRN2A0PK11 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CLRN2A0PK11 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CLRN2A0PK11 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
CLRN2A0PK11 MIR219A2-201ENST00000608502 1504 ntBASIC30.64■■■□□ 2.5
CLRN2A0PK11 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CLRN2A0PK11 AL033527.3-201ENST00000566366 1196 ntBASIC30.64■■■□□ 2.5
CLRN2A0PK11 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.64■■■□□ 2.5
CLRN2A0PK11 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CLRN2A0PK11 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CLRN2A0PK11 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.63■■■□□ 2.49
CLRN2A0PK11 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.63■■■□□ 2.49
CLRN2A0PK11 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CLRN2A0PK11 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
CLRN2A0PK11 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
CLRN2A0PK11 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.61■■■□□ 2.49
CLRN2A0PK11 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
CLRN2A0PK11 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.61■■■□□ 2.49
CLRN2A0PK11 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.61■■■□□ 2.49
CLRN2A0PK11 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
CLRN2A0PK11 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CLRN2A0PK11 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms