Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.01■□□□□ 0.95
A0A1W2PRF3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
A0A1W2PRF3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
A0A1W2PRF3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.01■□□□□ 0.95
A0A1W2PRF3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.01■□□□□ 0.95
A0A1W2PRF3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21■□□□□ 0.95
A0A1W2PRF3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21■□□□□ 0.95
A0A1W2PRF3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21■□□□□ 0.95
A0A1W2PRF3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
A0A1W2PRF3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
A0A1W2PRF3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
A0A1W2PRF3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
A0A1W2PRF3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
A0A1W2PRF3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
A0A1W2PRF3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
A0A1W2PRF3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
A0A1W2PRF3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.97■□□□□ 0.95
A0A1W2PRF3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L13-201ENST00000554103 1267 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L15-201ENST00000611059 1267 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L23-201ENST00000615195 1269 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L24-201ENST00000617576 1269 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L22-201ENST00000618238 1269 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L20-201ENST00000619712 1269 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L21-201ENST00000622058 1269 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L10-201ENST00000622460 1267 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 DUX4L25-201ENST00000624915 1269 ntBASIC20.97■□□□□ 0.95
A0A1W2PRF3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
A0A1W2PRF3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
A0A1W2PRF3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
A0A1W2PRF3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
A0A1W2PRF3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
A0A1W2PRF3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
A0A1W2PRF3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
A0A1W2PRF3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
A0A1W2PRF3 AC135983.2-203ENST00000454486 1613 ntBASIC20.96■□□□□ 0.95
A0A1W2PRF3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
A0A1W2PRF3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.96■□□□□ 0.95
A0A1W2PRF3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.95■□□□□ 0.94
A0A1W2PRF3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
A0A1W2PRF3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.95■□□□□ 0.94
A0A1W2PRF3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
A0A1W2PRF3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.95■□□□□ 0.94
A0A1W2PRF3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
A0A1W2PRF3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
A0A1W2PRF3 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.94■□□□□ 0.94
A0A1W2PRF3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
A0A1W2PRF3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
A0A1W2PRF3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
A0A1W2PRF3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
A0A1W2PRF3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
A0A1W2PRF3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
A0A1W2PRF3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.92■□□□□ 0.94
A0A1W2PRF3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
A0A1W2PRF3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
A0A1W2PRF3 AC139426.1-201ENST00000568218 2529 ntBASIC20.91■□□□□ 0.94
A0A1W2PRF3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
A0A1W2PRF3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
A0A1W2PRF3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.9■□□□□ 0.94
A0A1W2PRF3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
A0A1W2PRF3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
A0A1W2PRF3 MIR639-201ENST00000384974 98 ntBASIC20.89■□□□□ 0.93
A0A1W2PRF3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.89■□□□□ 0.93
A0A1W2PRF3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
A0A1W2PRF3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
A0A1W2PRF3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
A0A1W2PRF3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
A0A1W2PRF3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
A0A1W2PRF3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
A0A1W2PRF3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.88■□□□□ 0.93
A0A1W2PRF3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
A0A1W2PRF3 AL139393.2-201ENST00000608721 2025 ntBASIC20.87■□□□□ 0.93
A0A1W2PRF3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
A0A1W2PRF3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
A0A1W2PRF3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
A0A1W2PRF3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.86■□□□□ 0.93
A0A1W2PRF3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
A0A1W2PRF3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
A0A1W2PRF3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.85■□□□□ 0.93
A0A1W2PRF3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
A0A1W2PRF3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
A0A1W2PRF3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.84■□□□□ 0.93
A0A1W2PRF3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
A0A1W2PRF3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
A0A1W2PRF3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
A0A1W2PRF3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.83■□□□□ 0.93
A0A1W2PRF3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
A0A1W2PRF3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.83■□□□□ 0.92
A0A1W2PRF3 AC100797.4-201ENST00000631653 1827 ntBASIC20.83■□□□□ 0.92
A0A1W2PRF3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.82■□□□□ 0.92
A0A1W2PRF3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.82■□□□□ 0.92
A0A1W2PRF3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A0A1W2PRF3 AC110285.7-201ENST00000624417 1536 ntBASIC20.82■□□□□ 0.92
A0A1W2PRF3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms