Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-4A0A1B0GX49 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TRBV6-4A0A1B0GX49 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-4A0A1B0GX49 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TRBV6-4A0A1B0GX49 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-4A0A1B0GX49 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-4A0A1B0GX49 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-4A0A1B0GX49 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV6-4A0A1B0GX49 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV6-4A0A1B0GX49 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-4A0A1B0GX49 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-4A0A1B0GX49 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV6-4A0A1B0GX49 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV6-4A0A1B0GX49 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-4A0A1B0GX49 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRBV6-4A0A1B0GX49 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBV6-4A0A1B0GX49 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV6-4A0A1B0GX49 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-4A0A1B0GX49 AC087741.3-201ENST00000624270 1347 ntBASIC18.04■□□□□ 0.48
TRBV6-4A0A1B0GX49 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-4A0A1B0GX49 AC100797.4-201ENST00000631653 1827 ntBASIC18.04■□□□□ 0.48
TRBV6-4A0A1B0GX49 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-4A0A1B0GX49 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-4A0A1B0GX49 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRBV6-4A0A1B0GX49 AC135983.2-203ENST00000454486 1613 ntBASIC18.03■□□□□ 0.48
TRBV6-4A0A1B0GX49 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.03■□□□□ 0.48
TRBV6-4A0A1B0GX49 AC044849.2-201ENST00000606596 710 ntBASIC18.03■□□□□ 0.48
TRBV6-4A0A1B0GX49 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV6-4A0A1B0GX49 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-4A0A1B0GX49 LINC00273-201ENST00000539813 1452 ntBASIC18.02■□□□□ 0.48
TRBV6-4A0A1B0GX49 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV6-4A0A1B0GX49 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV6-4A0A1B0GX49 AL162393.1-201ENST00000437852 946 ntBASIC18.02■□□□□ 0.48
TRBV6-4A0A1B0GX49 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV6-4A0A1B0GX49 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.02■□□□□ 0.48
TRBV6-4A0A1B0GX49 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBV6-4A0A1B0GX49 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.02■□□□□ 0.47
TRBV6-4A0A1B0GX49 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV6-4A0A1B0GX49 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV6-4A0A1B0GX49 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRBV6-4A0A1B0GX49 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18■□□□□ 0.47
TRBV6-4A0A1B0GX49 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-4A0A1B0GX49 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-4A0A1B0GX49 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-4A0A1B0GX49 BX255925.1-201ENST00000566954 1854 ntBASIC17.99■□□□□ 0.47
TRBV6-4A0A1B0GX49 AP002414.2-202ENST00000590929 1450 ntBASIC17.98■□□□□ 0.47
TRBV6-4A0A1B0GX49 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRBV6-4A0A1B0GX49 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV6-4A0A1B0GX49 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV6-4A0A1B0GX49 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRBV6-4A0A1B0GX49 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV6-4A0A1B0GX49 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV6-4A0A1B0GX49 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-4A0A1B0GX49 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-4A0A1B0GX49 WHAMMP2-203ENST00000563942 1603 ntBASIC17.95■□□□□ 0.46
TRBV6-4A0A1B0GX49 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-4A0A1B0GX49 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV6-4A0A1B0GX49 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV6-4A0A1B0GX49 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV6-4A0A1B0GX49 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRBV6-4A0A1B0GX49 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-4A0A1B0GX49 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.94■□□□□ 0.46
TRBV6-4A0A1B0GX49 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-4A0A1B0GX49 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-4A0A1B0GX49 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV6-4A0A1B0GX49 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-4A0A1B0GX49 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV6-4A0A1B0GX49 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV6-4A0A1B0GX49 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.93■□□□□ 0.46
TRBV6-4A0A1B0GX49 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV6-4A0A1B0GX49 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRBV6-4A0A1B0GX49 LINC01003-201ENST00000564834 1764 ntBASIC17.92■□□□□ 0.46
TRBV6-4A0A1B0GX49 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV6-4A0A1B0GX49 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRBV6-4A0A1B0GX49 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV6-4A0A1B0GX49 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms