Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SRD5A1P1-201ENST00000442297 786 ntBASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 BX119927.1-201ENST00000636596 1552 ntBASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SYT6-210ENST00000641643 1587 ntBASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 GOLGA2P11-201ENST00000562660 1621 ntBASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 AL390961.4-201ENST00000623958 2535 ntBASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LCE3DQ9BYE3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms