Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF546Q86UE3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 PKD1P1-201ENST00000458669 6805 ntBASIC16.22■□□□□ 0.19
ZNF546Q86UE3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF546Q86UE3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 AL161938.1-201ENST00000569833 2180 ntBASIC16.21■□□□□ 0.19
ZNF546Q86UE3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.21■□□□□ 0.19
ZNF546Q86UE3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF546Q86UE3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF546Q86UE3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF546Q86UE3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF546Q86UE3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
ZNF546Q86UE3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF546Q86UE3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF546Q86UE3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF546Q86UE3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 BX842568.3-201ENST00000418104 571 ntBASIC16.2■□□□□ 0.18
ZNF546Q86UE3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 AC139713.2-201ENST00000641328 2723 ntBASIC16.2■□□□□ 0.18
ZNF546Q86UE3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms