Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GDNFP39905 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GDNFP39905 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17■□□□□ 0.31
GDNFP39905 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
GDNFP39905 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GDNFP39905 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17■□□□□ 0.31
GDNFP39905 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17■□□□□ 0.31
GDNFP39905 AC104581.1-202ENST00000635932 2618 ntBASIC17■□□□□ 0.31
GDNFP39905 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.99■□□□□ 0.31
GDNFP39905 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GDNFP39905 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GDNFP39905 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 AC009237.14-201ENST00000609975 1594 ntBASIC16.99■□□□□ 0.31
GDNFP39905 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.99■□□□□ 0.31
GDNFP39905 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
GDNFP39905 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 AC091799.1-201ENST00000422823 811 ntBASIC16.99■□□□□ 0.31
GDNFP39905 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.99■□□□□ 0.31
GDNFP39905 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.99■□□□□ 0.31
GDNFP39905 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.99■□□□□ 0.31
GDNFP39905 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GDNFP39905 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GDNFP39905 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GDNFP39905 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
GDNFP39905 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDNFP39905 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.98■□□□□ 0.31
GDNFP39905 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GDNFP39905 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
GDNFP39905 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.98■□□□□ 0.31
GDNFP39905 AC090340.1-201ENST00000620778 4980 ntBASIC16.98■□□□□ 0.31
GDNFP39905 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GDNFP39905 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.98■□□□□ 0.31
GDNFP39905 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 MFSD11-216ENST00000590393 1141 ntBASIC16.98■□□□□ 0.31
GDNFP39905 AC022517.1-201ENST00000592429 346 ntBASIC16.98■□□□□ 0.31
GDNFP39905 AC011767.1-201ENST00000617410 1153 ntBASIC16.98■□□□□ 0.31
GDNFP39905 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.98■□□□□ 0.31
GDNFP39905 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.98■□□□□ 0.31
GDNFP39905 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GDNFP39905 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDNFP39905 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.97■□□□□ 0.31
GDNFP39905 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 AC009113.1-201ENST00000570267 2443 ntBASIC16.97■□□□□ 0.31
GDNFP39905 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
GDNFP39905 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 AC016769.1-201ENST00000409132 1010 ntBASIC16.97■□□□□ 0.31
GDNFP39905 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.97■□□□□ 0.31
GDNFP39905 AC006015.1-201ENST00000429970 570 ntBASIC16.97■□□□□ 0.31
GDNFP39905 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.97■□□□□ 0.31
GDNFP39905 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GDNFP39905 IKBKGP1-201ENST00000612193 1073 ntBASIC16.97■□□□□ 0.31
GDNFP39905 AC243732.1-201ENST00000612648 864 ntBASIC16.97■□□□□ 0.31
GDNFP39905 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.97■□□□□ 0.31
GDNFP39905 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.97■□□□□ 0.31
GDNFP39905 AC018470.1-201ENST00000624790 3129 ntBASIC16.97■□□□□ 0.31
GDNFP39905 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
GDNFP39905 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 LTB4R2-202ENST00000528054 3092 ntBASIC16.97■□□□□ 0.31
GDNFP39905 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.97■□□□□ 0.31
GDNFP39905 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.97■□□□□ 0.31
GDNFP39905 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.97■□□□□ 0.31
GDNFP39905 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GDNFP39905 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms