Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.52■□□□□ 0.87
RARAP10276 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.52■□□□□ 0.87
RARAP10276 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RARAP10276 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RARAP10276 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RARAP10276 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.51■□□□□ 0.87
RARAP10276 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.51■□□□□ 0.87
RARAP10276 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.51■□□□□ 0.87
RARAP10276 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.51■□□□□ 0.87
RARAP10276 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.51■□□□□ 0.87
RARAP10276 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
RARAP10276 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
RARAP10276 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.51■□□□□ 0.87
RARAP10276 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.51■□□□□ 0.87
RARAP10276 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.51■□□□□ 0.87
RARAP10276 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.51■□□□□ 0.87
RARAP10276 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.51■□□□□ 0.87
RARAP10276 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.51■□□□□ 0.87
RARAP10276 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RARAP10276 PNMA6B-201ENST00000538162 1200 ntBASIC20.51■□□□□ 0.87
RARAP10276 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.51■□□□□ 0.87
RARAP10276 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.51■□□□□ 0.87
RARAP10276 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.51■□□□□ 0.87
RARAP10276 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RARAP10276 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
RARAP10276 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RARAP10276 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.51■□□□□ 0.87
RARAP10276 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RARAP10276 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.5■□□□□ 0.87
RARAP10276 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.5■□□□□ 0.87
RARAP10276 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RARAP10276 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.5■□□□□ 0.87
RARAP10276 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.5■□□□□ 0.87
RARAP10276 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.5■□□□□ 0.87
RARAP10276 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.5■□□□□ 0.87
RARAP10276 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.5■□□□□ 0.87
RARAP10276 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RARAP10276 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RARAP10276 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RARAP10276 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.5■□□□□ 0.87
RARAP10276 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 TFP1-202ENST00000475455 1573 ntBASIC20.5■□□□□ 0.87
RARAP10276 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RARAP10276 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RARAP10276 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARAP10276 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.49■□□□□ 0.87
RARAP10276 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARAP10276 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.49■□□□□ 0.87
RARAP10276 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARAP10276 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RARAP10276 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RARAP10276 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RARAP10276 AL355802.2-201ENST00000402069 882 ntBASIC20.49■□□□□ 0.87
RARAP10276 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.49■□□□□ 0.87
RARAP10276 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.49■□□□□ 0.87
RARAP10276 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.49■□□□□ 0.87
RARAP10276 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.49■□□□□ 0.87
RARAP10276 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.49■□□□□ 0.87
RARAP10276 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.49■□□□□ 0.87
RARAP10276 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RARAP10276 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
RARAP10276 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARAP10276 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RARAP10276 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RARAP10276 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.48■□□□□ 0.87
RARAP10276 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARAP10276 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARAP10276 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.48■□□□□ 0.87
RARAP10276 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARAP10276 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RARAP10276 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RARAP10276 RPS2P52-201ENST00000469610 820 ntBASIC20.48■□□□□ 0.87
RARAP10276 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.48■□□□□ 0.87
RARAP10276 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.48■□□□□ 0.87
RARAP10276 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.48■□□□□ 0.87
RARAP10276 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RARAP10276 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RARAP10276 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms