Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SCML1-202ENST00000380043 2830 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 PLK4-201ENST00000270861 3841 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF619-204ENST00000447116 4153 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 PXYLP1-202ENST00000393010 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SUN1-210ENST00000425407 3868 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 JAM2-201ENST00000312957 4209 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 C1orf94-202ENST00000488417 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 OR2W5-203ENST00000641857 1597 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 GABRA1-204ENST00000437025 4087 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 EDRF1-202ENST00000356792 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 Y_RNA.4-201ENST00000362333 112 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 RNU4-41P-201ENST00000364426 143 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 CRABP2-202ENST00000368221 783 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SNORA36A-201ENST00000384221 132 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AL078599.1-201ENST00000402075 293 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AL450346.1-201ENST00000403497 559 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR1227-201ENST00000408484 88 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 CYCSP19-201ENST00000411715 316 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 RPL12P10-201ENST00000413498 498 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AC026884.1-201ENST00000418296 457 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 RPSAP19-201ENST00000431241 880 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AL670729.1-201ENST00000436779 283 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 HLA-DRB6-203ENST00000437650 715 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AP000350.1-201ENST00000443377 532 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 CYCSP51-201ENST00000443545 318 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC02210-201ENST00000444561 288 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 RN7SL58P-201ENST00000473445 294 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AC109329.2-201ENST00000519658 482 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 INO80E-209ENST00000567254 625 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AC087222.1-201ENST00000571113 504 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR378I-201ENST00000582688 76 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AC145207.4-201ENST00000583521 450 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR4712-201ENST00000583750 82 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF283-208ENST00000593268 552 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AC060764.1-201ENST00000603811 454 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AP003357.1-201ENST00000604497 148 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 uc_338.26-201ENST00000612659 160 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AC134878.2-201ENST00000620700 1265 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 MIR6727-201ENST00000620702 65 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 LINC00969-258ENST00000625665 496 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 PTCH1-208ENST00000430669 8232 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 COL14A1-201ENST00000247781 3450 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SEMA4A-205ENST00000368286 3135 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AC025470.1-201ENST00000510053 2032 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 TERB1-202ENST00000433154 2446 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 TCERG1-201ENST00000296702 4654 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 KCNMB1-201ENST00000274629 5052 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 CES5A-201ENST00000290567 2084 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 TMEM196-201ENST00000405764 3975 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 POLR2M-202ENST00000380557 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 RRN3P2-202ENST00000564580 2132 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 CDH1-214ENST00000621016 3304 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AC091564.4-201ENST00000533934 2194 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AR-208ENST00000612452 10676 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 KLF7-203ENST00000421199 3037 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 PKP1-202ENST00000352845 2244 ntTSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 ZFAT-207ENST00000520214 4294 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 LAMB3-203ENST00000391911 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 KIAA0825-201ENST00000329378 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 PRAMENP-202ENST00000419303 1869 ntTSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 AL133243.4-201ENST00000623116 3109 ntBASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 BTN2A2-203ENST00000416795 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
KRTAP3-3Q9BYR6 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 TRMO-207ENST00000611338 3635 ntTSL 5 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 NICN1-208ENST00000615713 1921 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
KRTAP3-3Q9BYR6 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms