RNA–Protein interactions for RNA: ENST00000356792.8

EDRF1-202, Transcript of erythroid differentiation regulatory factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene EDRF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-202ENST00000356792 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
EDRF1-202ENST00000356792 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
EDRF1-202ENST00000356792 ABCC9O60706 1549 aa20.11■□□□□ 0.81
EDRF1-202ENST00000356792 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
EDRF1-202ENST00000356792 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
EDRF1-202ENST00000356792 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
EDRF1-202ENST00000356792 NACADO15069 1562 aa18.98■□□□□ 0.63
EDRF1-202ENST00000356792 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
EDRF1-202ENST00000356792 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
EDRF1-202ENST00000356792 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
EDRF1-202ENST00000356792 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
EDRF1-202ENST00000356792 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
EDRF1-202ENST00000356792 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
EDRF1-202ENST00000356792 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
EDRF1-202ENST00000356792 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.5
EDRF1-202ENST00000356792 HRCP23327 699 aa18.11■□□□□ 0.49
EDRF1-202ENST00000356792 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
EDRF1-202ENST00000356792 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
EDRF1-202ENST00000356792 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
EDRF1-202ENST00000356792 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
EDRF1-202ENST00000356792 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
EDRF1-202ENST00000356792 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
EDRF1-202ENST00000356792 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
EDRF1-202ENST00000356792 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.42
EDRF1-202ENST00000356792 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
EDRF1-202ENST00000356792 MYT1Q01538 1121 aa17.66■□□□□ 0.42
EDRF1-202ENST00000356792 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
EDRF1-202ENST00000356792 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
EDRF1-202ENST00000356792 PCGF6Q9BYE7 350 aa17.61■□□□□ 0.41
EDRF1-202ENST00000356792 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
EDRF1-202ENST00000356792 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
EDRF1-202ENST00000356792 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
EDRF1-202ENST00000356792 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
EDRF1-202ENST00000356792 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
EDRF1-202ENST00000356792 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
EDRF1-202ENST00000356792 FAM9AQ8IZU1 332 aaPredicted RBP17.5■□□□□ 0.39
EDRF1-202ENST00000356792 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
EDRF1-202ENST00000356792 WIZO95785 1651 aa17.33■□□□□ 0.37
EDRF1-202ENST00000356792 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
EDRF1-202ENST00000356792 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
EDRF1-202ENST00000356792 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
EDRF1-202ENST00000356792 NESP48681 1621 aa17.22■□□□□ 0.35
EDRF1-202ENST00000356792 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
EDRF1-202ENST00000356792 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
EDRF1-202ENST00000356792 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
EDRF1-202ENST00000356792 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
EDRF1-202ENST00000356792 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
EDRF1-202ENST00000356792 FBLN2P98095 1184 aa17.07■□□□□ 0.32
EDRF1-202ENST00000356792 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
EDRF1-202ENST00000356792 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
EDRF1-202ENST00000356792 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
EDRF1-202ENST00000356792 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
EDRF1-202ENST00000356792 CFTRP13569 1480 aa16.97■□□□□ 0.31
EDRF1-202ENST00000356792 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
EDRF1-202ENST00000356792 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
EDRF1-202ENST00000356792 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
EDRF1-202ENST00000356792 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
EDRF1-202ENST00000356792 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
EDRF1-202ENST00000356792 GTF3C3Q9Y5Q9 886 aa16.87■□□□□ 0.29
EDRF1-202ENST00000356792 CUX2O14529 1486 aa16.85■□□□□ 0.29
EDRF1-202ENST00000356792 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
EDRF1-202ENST00000356792 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
EDRF1-202ENST00000356792 APLP2Q06481 763 aa16.79■□□□□ 0.28
EDRF1-202ENST00000356792 SOGA1O94964 1423 aa16.76■□□□□ 0.27
EDRF1-202ENST00000356792 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
EDRF1-202ENST00000356792 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
EDRF1-202ENST00000356792 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
EDRF1-202ENST00000356792 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
EDRF1-202ENST00000356792 TRIM26Q12899 539 aaPredicted RBP16.7■□□□□ 0.26
EDRF1-202ENST00000356792 BCL11AQ9H165 835 aa16.7■□□□□ 0.26
EDRF1-202ENST00000356792 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
EDRF1-202ENST00000356792 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
EDRF1-202ENST00000356792 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
EDRF1-202ENST00000356792 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
EDRF1-202ENST00000356792 RAD54L2Q9Y4B4 1467 aa16.6■□□□□ 0.25
EDRF1-202ENST00000356792 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
EDRF1-202ENST00000356792 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.255e-7■■■■□ 23.3
EDRF1-202ENST00000356792 WDR62O43379 1518 aa16.58■□□□□ 0.24
EDRF1-202ENST00000356792 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
EDRF1-202ENST00000356792 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
EDRF1-202ENST00000356792 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
EDRF1-202ENST00000356792 POLA1P09884 1462 aaPredicted RBP16.55■□□□□ 0.24
EDRF1-202ENST00000356792 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
EDRF1-202ENST00000356792 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
EDRF1-202ENST00000356792 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
EDRF1-202ENST00000356792 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
EDRF1-202ENST00000356792 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
EDRF1-202ENST00000356792 CUX1P39880 1505 aa16.47■□□□□ 0.23
EDRF1-202ENST00000356792 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
EDRF1-202ENST00000356792 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
EDRF1-202ENST00000356792 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
EDRF1-202ENST00000356792 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
EDRF1-202ENST00000356792 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
EDRF1-202ENST00000356792 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
EDRF1-202ENST00000356792 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
EDRF1-202ENST00000356792 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
EDRF1-202ENST00000356792 CCER1Q8TC90 406 aaPredicted RBP16.35■□□□□ 0.21
EDRF1-202ENST00000356792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
EDRF1-202ENST00000356792 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
EDRF1-202ENST00000356792 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms