RNA–Protein interactions for RNA: ENST00000391911.5

LAMB3-203, Transcript of laminin subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB3, Length 4,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB3-203ENST00000391911 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
LAMB3-203ENST00000391911 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
LAMB3-203ENST00000391911 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
LAMB3-203ENST00000391911 SUPT5HO00267 1087 aaKnown RBP19.07■□□□□ 0.64
LAMB3-203ENST00000391911 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.55
LAMB3-203ENST00000391911 ABCC9O60706 1549 aa18.37■□□□□ 0.53
LAMB3-203ENST00000391911 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
LAMB3-203ENST00000391911 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
LAMB3-203ENST00000391911 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
LAMB3-203ENST00000391911 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
LAMB3-203ENST00000391911 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.44
LAMB3-203ENST00000391911 TRIM41Q8WV44 630 aa17.75■□□□□ 0.43
LAMB3-203ENST00000391911 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
LAMB3-203ENST00000391911 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
LAMB3-203ENST00000391911 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
LAMB3-203ENST00000391911 NACADO15069 1562 aa17.59■□□□□ 0.41
LAMB3-203ENST00000391911 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
LAMB3-203ENST00000391911 LOC105371045A0A1W2PR82 267 aa17.38■□□□□ 0.37
LAMB3-203ENST00000391911 HRCP23327 699 aa17.38■□□□□ 0.37
LAMB3-203ENST00000391911 MYO15BQ96JP2 1530 aa17.35■□□□□ 0.37
LAMB3-203ENST00000391911 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
LAMB3-203ENST00000391911 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
LAMB3-203ENST00000391911 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
LAMB3-203ENST00000391911 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
LAMB3-203ENST00000391911 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
LAMB3-203ENST00000391911 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
LAMB3-203ENST00000391911 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
LAMB3-203ENST00000391911 APLP2Q06481 763 aa17.1■□□□□ 0.33
LAMB3-203ENST00000391911 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
LAMB3-203ENST00000391911 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
LAMB3-203ENST00000391911 BAZ1AQ9NRL2 1556 aaPredicted RBP17.04■□□□□ 0.32
LAMB3-203ENST00000391911 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
LAMB3-203ENST00000391911 WIZO95785 1651 aa16.83■□□□□ 0.28
LAMB3-203ENST00000391911 BAZ1BQ9UIG0 1483 aaKnown RBP16.82■□□□□ 0.28
LAMB3-203ENST00000391911 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
LAMB3-203ENST00000391911 ATP1B4Q9UN42 357 aaPredicted RBP16.78■□□□□ 0.28
LAMB3-203ENST00000391911 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
LAMB3-203ENST00000391911 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
LAMB3-203ENST00000391911 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
LAMB3-203ENST00000391911 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
LAMB3-203ENST00000391911 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
LAMB3-203ENST00000391911 WRNQ14191 1432 aaPredicted RBP eCLIP16.62■□□□□ 0.25
LAMB3-203ENST00000391911 SMARCA2P51531 1590 aa16.61■□□□□ 0.25
LAMB3-203ENST00000391911 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
LAMB3-203ENST00000391911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
LAMB3-203ENST00000391911 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
LAMB3-203ENST00000391911 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
LAMB3-203ENST00000391911 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
LAMB3-203ENST00000391911 EEA1Q15075 1411 aa16.46■□□□□ 0.23
LAMB3-203ENST00000391911 YTHDC1Q96MU7 727 aaKnown RBP16.46■□□□□ 0.23
LAMB3-203ENST00000391911 SOGA1O94964 1423 aa16.45■□□□□ 0.22
LAMB3-203ENST00000391911 ITGAEP38570 1179 aa16.41■□□□□ 0.22
LAMB3-203ENST00000391911 DIEXFQ68CQ4 756 aaKnown RBP16.37■□□□□ 0.21
LAMB3-203ENST00000391911 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
LAMB3-203ENST00000391911 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
LAMB3-203ENST00000391911 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
LAMB3-203ENST00000391911 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
LAMB3-203ENST00000391911 CEP162Q5TB80 1403 aa16.33■□□□□ 0.2
LAMB3-203ENST00000391911 TNIKQ9UKE5 1360 aa16.31■□□□□ 0.2
LAMB3-203ENST00000391911 NCAPD3P42695 1498 aa16.31■□□□□ 0.2
LAMB3-203ENST00000391911 FBLN2P98095 1184 aa16.3■□□□□ 0.2
LAMB3-203ENST00000391911 KIF27Q86VH2 1401 aa16.3■□□□□ 0.2
LAMB3-203ENST00000391911 CLIP1P30622 1438 aa16.29■□□□□ 0.2
LAMB3-203ENST00000391911 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
LAMB3-203ENST00000391911 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
LAMB3-203ENST00000391911 RUSC2Q8N2Y8 1516 aa16.2■□□□□ 0.18
LAMB3-203ENST00000391911 FAM50AQ14320 339 aaKnown RBP16.19■□□□□ 0.18
LAMB3-203ENST00000391911 CUX2O14529 1486 aa16.18■□□□□ 0.18
LAMB3-203ENST00000391911 MYT1LQ9UL68 1186 aa16.15■□□□□ 0.18
LAMB3-203ENST00000391911 GTF3C3Q9Y5Q9 886 aa16.13■□□□□ 0.17
LAMB3-203ENST00000391911 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
LAMB3-203ENST00000391911 ACIN1Q9UKV3 1341 aaKnown RBP16.11■□□□□ 0.17
LAMB3-203ENST00000391911 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
LAMB3-203ENST00000391911 ZNF316A6NFI3 1004 aaPredicted RBP16.09■□□□□ 0.17
LAMB3-203ENST00000391911 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
LAMB3-203ENST00000391911 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
LAMB3-203ENST00000391911 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
LAMB3-203ENST00000391911 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
LAMB3-203ENST00000391911 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
LAMB3-203ENST00000391911 CFTRP13569 1480 aa16.04■□□□□ 0.16
LAMB3-203ENST00000391911 MYT1Q01538 1121 aa16.03■□□□□ 0.16
LAMB3-203ENST00000391911 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
LAMB3-203ENST00000391911 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
LAMB3-203ENST00000391911 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
LAMB3-203ENST00000391911 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
LAMB3-203ENST00000391911 CHMP7Q8WUX9 453 aaPredicted RBP16■□□□□ 0.15
LAMB3-203ENST00000391911 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
LAMB3-203ENST00000391911 NEFLP07196 543 aa15.96■□□□□ 0.15
LAMB3-203ENST00000391911 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
LAMB3-203ENST00000391911 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
LAMB3-203ENST00000391911 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
LAMB3-203ENST00000391911 NESP48681 1621 aa15.92■□□□□ 0.14
LAMB3-203ENST00000391911 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
LAMB3-203ENST00000391911 IGF1RP08069 1367 aa15.88■□□□□ 0.13
LAMB3-203ENST00000391911 MTUS2Q5JR59 1369 aa15.88■□□□□ 0.13
LAMB3-203ENST00000391911 CDK11AQ9UQ88 783 aaPredicted RBP15.88■□□□□ 0.13
LAMB3-203ENST00000391911 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
LAMB3-203ENST00000391911 CUX1P39880 1505 aa15.87■□□□□ 0.13
LAMB3-203ENST00000391911 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
LAMB3-203ENST00000391911 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms