RNA–Protein interactions for RNA: ENST00000533432.5

CSRP1-219, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSRP1, Length 1,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-219ENST00000533432 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
CSRP1-219ENST00000533432 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
CSRP1-219ENST00000533432 ABCC9O60706 1549 aa26.69■■□□□ 1.86
CSRP1-219ENST00000533432 RB1CC1Q8TDY2 1594 aa25.59■■□□□ 1.69
CSRP1-219ENST00000533432 NACADO15069 1562 aa25.44■■□□□ 1.66
CSRP1-219ENST00000533432 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
CSRP1-219ENST00000533432 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
CSRP1-219ENST00000533432 UNC13AQ9UPW8 1703 aa24.9■■□□□ 1.58
CSRP1-219ENST00000533432 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
CSRP1-219ENST00000533432 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
CSRP1-219ENST00000533432 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
CSRP1-219ENST00000533432 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.56
CSRP1-219ENST00000533432 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
CSRP1-219ENST00000533432 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
CSRP1-219ENST00000533432 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
CSRP1-219ENST00000533432 EIF4G1Q04637 1599 aaKnown RBP24.18■■□□□ 1.46
CSRP1-219ENST00000533432 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
CSRP1-219ENST00000533432 CECR2Q9BXF3 1484 aa24.1■■□□□ 1.45
CSRP1-219ENST00000533432 NCAPD3P42695 1498 aa23.45■■□□□ 1.34
CSRP1-219ENST00000533432 SMARCA2P51531 1590 aa23.37■■□□□ 1.33
CSRP1-219ENST00000533432 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
CSRP1-219ENST00000533432 HMGXB3Q12766 1538 aa23.35■■□□□ 1.33
CSRP1-219ENST00000533432 ATAD2BQ9ULI0 1458 aa23.35■■□□□ 1.33
CSRP1-219ENST00000533432 BAZ1AQ9NRL2 1556 aaPredicted RBP23.31■■□□□ 1.32
CSRP1-219ENST00000533432 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
CSRP1-219ENST00000533432 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
CSRP1-219ENST00000533432 CUX2O14529 1486 aa23.14■■□□□ 1.29
CSRP1-219ENST00000533432 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
CSRP1-219ENST00000533432 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
CSRP1-219ENST00000533432 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
CSRP1-219ENST00000533432 NESP48681 1621 aa22.93■■□□□ 1.26
CSRP1-219ENST00000533432 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
CSRP1-219ENST00000533432 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
CSRP1-219ENST00000533432 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
CSRP1-219ENST00000533432 WIZO95785 1651 aa22.73■■□□□ 1.23
CSRP1-219ENST00000533432 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
CSRP1-219ENST00000533432 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
CSRP1-219ENST00000533432 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
CSRP1-219ENST00000533432 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.2
CSRP1-219ENST00000533432 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
CSRP1-219ENST00000533432 WDR62O43379 1518 aa22.54■■□□□ 1.2
CSRP1-219ENST00000533432 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
CSRP1-219ENST00000533432 CFTRP13569 1480 aa22.49■■□□□ 1.19
CSRP1-219ENST00000533432 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
CSRP1-219ENST00000533432 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
CSRP1-219ENST00000533432 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
CSRP1-219ENST00000533432 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
CSRP1-219ENST00000533432 ABCC8Q09428 1581 aa22.08■■□□□ 1.13
CSRP1-219ENST00000533432 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
CSRP1-219ENST00000533432 TOPBP1Q92547 1522 aa22.02■■□□□ 1.12
CSRP1-219ENST00000533432 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
CSRP1-219ENST00000533432 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
CSRP1-219ENST00000533432 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
CSRP1-219ENST00000533432 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
CSRP1-219ENST00000533432 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
CSRP1-219ENST00000533432 TRIM41Q8WV44 630 aa21.82■■□□□ 1.08
CSRP1-219ENST00000533432 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
CSRP1-219ENST00000533432 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
CSRP1-219ENST00000533432 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.07
CSRP1-219ENST00000533432 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
CSRP1-219ENST00000533432 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
CSRP1-219ENST00000533432 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
CSRP1-219ENST00000533432 SOGA1O94964 1423 aa21.68■■□□□ 1.06
CSRP1-219ENST00000533432 FGD5Q6ZNL6 1462 aa21.67■■□□□ 1.06
CSRP1-219ENST00000533432 ARHGEF11O15085 1522 aa21.66■■□□□ 1.06
CSRP1-219ENST00000533432 CUX1P39880 1505 aa21.65■■□□□ 1.06
CSRP1-219ENST00000533432 CHD1O14646 1710 aa21.65■■□□□ 1.06
CSRP1-219ENST00000533432 RAD54L2Q9Y4B4 1467 aa21.64■■□□□ 1.06
CSRP1-219ENST00000533432 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.05
CSRP1-219ENST00000533432 TDRD9Q8NDG6 1382 aaKnown RBP21.57■■□□□ 1.04
CSRP1-219ENST00000533432 GRIN2BQ13224 1484 aa21.55■■□□□ 1.04
CSRP1-219ENST00000533432 SNAPC4Q5SXM2 1469 aa21.55■■□□□ 1.04
CSRP1-219ENST00000533432 FBLN2P98095 1184 aa21.5■■□□□ 1.03
CSRP1-219ENST00000533432 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
CSRP1-219ENST00000533432 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
CSRP1-219ENST00000533432 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
CSRP1-219ENST00000533432 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
CSRP1-219ENST00000533432 CLASP1Q7Z460 1538 aa21.47■■□□□ 1.03
CSRP1-219ENST00000533432 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.03
CSRP1-219ENST00000533432 PBRM1Q86U86 1689 aa21.45■■□□□ 1.02
CSRP1-219ENST00000533432 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
CSRP1-219ENST00000533432 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
CSRP1-219ENST00000533432 ARAP1Q96P48 1450 aa21.43■■□□□ 1.02
CSRP1-219ENST00000533432 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
CSRP1-219ENST00000533432 TOP2BQ02880 1626 aa21.39■■□□□ 1.01
CSRP1-219ENST00000533432 BIVM-ERCC5R4GMW8 1640 aa21.39■■□□□ 1.01
CSRP1-219ENST00000533432 CYB5RLQ6IPT4 315 aa21.37■■□□□ 1.01
CSRP1-219ENST00000533432 ADAMTS12P58397 1594 aa21.28■■□□□ 1
CSRP1-219ENST00000533432 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
CSRP1-219ENST00000533432 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
CSRP1-219ENST00000533432 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
CSRP1-219ENST00000533432 NUP160Q12769 1436 aa21.2■□□□□ 0.98
CSRP1-219ENST00000533432 CEP170Q5SW79 1584 aa21.14■□□□□ 0.98
CSRP1-219ENST00000533432 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
CSRP1-219ENST00000533432 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
CSRP1-219ENST00000533432 ERCC6L2Q5T890 1561 aa21.02■□□□□ 0.95
CSRP1-219ENST00000533432 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
CSRP1-219ENST00000533432 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
CSRP1-219ENST00000533432 CUL7Q14999 1698 aa20.96■□□□□ 0.95
CSRP1-219ENST00000533432 PRG4Q92954 1404 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms