RNA–Protein interactions for RNA: ENST00000361409.2

ARHGEF11-201, Transcript of Rho guanine nucleotide exchange factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF11, Length 5,788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF11-201ENST00000361409 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
ARHGEF11-201ENST00000361409 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
ARHGEF11-201ENST00000361409 SUPT5HO00267 1087 aaKnown RBP18.98■□□□□ 0.63
ARHGEF11-201ENST00000361409 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
ARHGEF11-201ENST00000361409 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
ARHGEF11-201ENST00000361409 APLP2Q06481 763 aa18.3■□□□□ 0.52
ARHGEF11-201ENST00000361409 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF11-201ENST00000361409 CENPBP07199 599 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF11-201ENST00000361409 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF11-201ENST00000361409 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
ARHGEF11-201ENST00000361409 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
ARHGEF11-201ENST00000361409 MYT1Q01538 1121 aa17.88■□□□□ 0.45
ARHGEF11-201ENST00000361409 TRIM41Q8WV44 630 aa17.83■□□□□ 0.45
ARHGEF11-201ENST00000361409 CCER1Q8TC90 406 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF11-201ENST00000361409 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
ARHGEF11-201ENST00000361409 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF11-201ENST00000361409 UBTFP17480 764 aaKnown RBP17.49■□□□□ 0.39
ARHGEF11-201ENST00000361409 NEFLP07196 543 aa17.48■□□□□ 0.39
ARHGEF11-201ENST00000361409 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
ARHGEF11-201ENST00000361409 HRCP23327 699 aa17.42■□□□□ 0.38
ARHGEF11-201ENST00000361409 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF11-201ENST00000361409 CHIC1Q5VXU3 224 aa17.22■□□□□ 0.35
ARHGEF11-201ENST00000361409 RANGAP1P46060 587 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF11-201ENST00000361409 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
ARHGEF11-201ENST00000361409 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
ARHGEF11-201ENST00000361409 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF11-201ENST00000361409 PPARGC1BQ86YN6 1023 aaKnown RBP16.87■□□□□ 0.29
ARHGEF11-201ENST00000361409 DIEXFQ68CQ4 756 aaKnown RBP16.82■□□□□ 0.28
ARHGEF11-201ENST00000361409 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
ARHGEF11-201ENST00000361409 ITGAEP38570 1179 aa16.71■□□□□ 0.27
ARHGEF11-201ENST00000361409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF11-201ENST00000361409 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
ARHGEF11-201ENST00000361409 RTL5Q5HYW3 569 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF11-201ENST00000361409 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
ARHGEF11-201ENST00000361409 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
ARHGEF11-201ENST00000361409 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF11-201ENST00000361409 ANP32CO43423 234 aa16.51■□□□□ 0.23
ARHGEF11-201ENST00000361409 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
ARHGEF11-201ENST00000361409 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
ARHGEF11-201ENST00000361409 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
ARHGEF11-201ENST00000361409 CCDC180Q9P1Z9 1646 aa16.42■□□□□ 0.22
ARHGEF11-201ENST00000361409 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF11-201ENST00000361409 ABCC9O60706 1549 aa16.42■□□□□ 0.22
ARHGEF11-201ENST00000361409 GTF3C3Q9Y5Q9 886 aa16.41■□□□□ 0.22
ARHGEF11-201ENST00000361409 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
ARHGEF11-201ENST00000361409 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
ARHGEF11-201ENST00000361409 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
ARHGEF11-201ENST00000361409 NEUROD1Q13562 356 aa16.31■□□□□ 0.2
ARHGEF11-201ENST00000361409 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
ARHGEF11-201ENST00000361409 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
ARHGEF11-201ENST00000361409 CNGB1Q14028 1251 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF11-201ENST00000361409 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF11-201ENST00000361409 ANP32AP39687 249 aaKnown RBP16.15■□□□□ 0.18
ARHGEF11-201ENST00000361409 EEA1Q15075 1411 aa16.14■□□□□ 0.18
ARHGEF11-201ENST00000361409 SCRIBQ14160 1630 aa16.13■□□□□ 0.17
ARHGEF11-201ENST00000361409 BCANQ96GW7 911 aa16.1■□□□□ 0.17
ARHGEF11-201ENST00000361409 TONSLQ96HA7 1378 aa16.09■□□□□ 0.17
ARHGEF11-201ENST00000361409 NEFMP07197 916 aa16.07■□□□□ 0.16
ARHGEF11-201ENST00000361409 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
ARHGEF11-201ENST00000361409 ZNF326Q5BKZ1 582 aaKnown RBP16.04■□□□□ 0.16
ARHGEF11-201ENST00000361409 GOLGA3Q08378 1498 aa15.93■□□□□ 0.14
ARHGEF11-201ENST00000361409 FKBP8Q14318 412 aa15.91■□□□□ 0.14
ARHGEF11-201ENST00000361409 RB1CC1Q8TDY2 1594 aa15.9■□□□□ 0.14
ARHGEF11-201ENST00000361409 CLIP1P30622 1438 aa15.9■□□□□ 0.14
ARHGEF11-201ENST00000361409 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF11-201ENST00000361409 UPF2Q9HAU5 1272 aaKnown RBP15.88■□□□□ 0.13
ARHGEF11-201ENST00000361409 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
ARHGEF11-201ENST00000361409 NACADO15069 1562 aa15.86■□□□□ 0.13
ARHGEF11-201ENST00000361409 ANP32BQ92688 251 aaKnown RBP15.86■□□□□ 0.13
ARHGEF11-201ENST00000361409 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
ARHGEF11-201ENST00000361409 FBLN2P98095 1184 aa15.85■□□□□ 0.13
ARHGEF11-201ENST00000361409 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
ARHGEF11-201ENST00000361409 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
ARHGEF11-201ENST00000361409 DDX10Q13206 875 aaKnown RBP15.8■□□□□ 0.12
ARHGEF11-201ENST00000361409 CEP162Q5TB80 1403 aa15.8■□□□□ 0.12
ARHGEF11-201ENST00000361409 ZNF777Q9ULD5 760 aaPredicted RBP15.79■□□□□ 0.12
ARHGEF11-201ENST00000361409 MTUS2Q5JR59 1369 aa15.78■□□□□ 0.12
ARHGEF11-201ENST00000361409 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
ARHGEF11-201ENST00000361409 TMC1Q8TDI8 760 aa15.76■□□□□ 0.11
ARHGEF11-201ENST00000361409 CCDC136Q96JN2 1154 aa15.75■□□□□ 0.11
ARHGEF11-201ENST00000361409 EIF4G2P78344 907 aaKnown RBP eCLIP15.72■□□□□ 0.11
ARHGEF11-201ENST00000361409 FAM9BQ8IZU0 186 aa15.71■□□□□ 0.11
ARHGEF11-201ENST00000361409 NPM2Q86SE8 214 aaKnown RBP15.71■□□□□ 0.11
ARHGEF11-201ENST00000361409 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.119e-6■■■■■ 50.1
ARHGEF11-201ENST00000361409 GLIPR1L2Q4G1C9 344 aa15.7■□□□□ 0.1
ARHGEF11-201ENST00000361409 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
ARHGEF11-201ENST00000361409 TSPY4P0CV99 314 aa15.7■□□□□ 0.1
ARHGEF11-201ENST00000361409 TSPY10P0CW01 314 aa15.7■□□□□ 0.1
ARHGEF11-201ENST00000361409 DDRGK1Q96HY6 314 aa15.69■□□□□ 0.1
ARHGEF11-201ENST00000361409 MRS2Q9HD23 443 aa15.69■□□□□ 0.1
ARHGEF11-201ENST00000361409 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
ARHGEF11-201ENST00000361409 WDR43Q15061 677 aaKnown RBP eCLIP15.68■□□□□ 0.1
ARHGEF11-201ENST00000361409 MIER1Q8N108 512 aa15.68■□□□□ 0.1
ARHGEF11-201ENST00000361409 HSP90AA1P07900 732 aaKnown RBP15.68■□□□□ 0.1
ARHGEF11-201ENST00000361409 ANP32EQ9BTT0 268 aa15.67■□□□□ 0.1
ARHGEF11-201ENST00000361409 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
ARHGEF11-201ENST00000361409 EIF5BO60841 1220 aaKnown RBP15.66■□□□□ 0.1
ARHGEF11-201ENST00000361409 BAZ1AQ9NRL2 1556 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF11-201ENST00000361409 TIMELESSQ9UNS1 1208 aa15.66■□□□□ 0.1
ARHGEF11-201ENST00000361409 ARID3CA6NKF2 412 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms