RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 AEBP2Q6ZN18 517 aaPredicted RBP12.22□□□□□ -0.45
RNU4-41P-201ENST00000364426 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
RNU4-41P-201ENST00000364426 SENP3Q9H4L4 574 aaPredicted RBP10.43□□□□□ -0.74
RNU4-41P-201ENST00000364426 PHF23Q9BUL5 403 aaPredicted RBP10.28□□□□□ -0.76
RNU4-41P-201ENST00000364426 FOXD1Q16676 465 aa9.69□□□□□ -0.86
RNU4-41P-201ENST00000364426 PLPPR3Q6T4P5 718 aa9.4□□□□□ -0.9
RNU4-41P-201ENST00000364426 PPP6R1Q9UPN7 881 aa9.11□□□□□ -0.95
RNU4-41P-201ENST00000364426 MSH5O43196 834 aa9.06□□□□□ -0.96
RNU4-41P-201ENST00000364426 ADRA2BP18089 450 aa9.06□□□□□ -0.96
RNU4-41P-201ENST00000364426 PIAS4Q8N2W9 510 aaPredicted RBP9.05□□□□□ -0.96
RNU4-41P-201ENST00000364426 POTEDQ86YR6 584 aa8.67□□□□□ -1.02
RNU4-41P-201ENST00000364426 SCAF1Q9H7N4 1312 aaKnown RBP8.34□□□□□ -1.07
RNU4-41P-201ENST00000364426 MAPK8IP2Q13387 824 aaPredicted RBP8.3□□□□□ -1.08
RNU4-41P-201ENST00000364426 DMRT2Q9Y5R5 561 aa8.29□□□□□ -1.08
RNU4-41P-201ENST00000364426 PPP4R3CPQ6ZMV5 832 aa8.22□□□□□ -1.09
RNU4-41P-201ENST00000364426 CNKSR2Q8WXI2 1034 aa8.08□□□□□ -1.12
RNU4-41P-201ENST00000364426 HOXD11P31277 338 aaPredicted RBP8.04□□□□□ -1.12
RNU4-41P-201ENST00000364426 RNF216Q9NWF9 866 aaPredicted RBP7.99□□□□□ -1.13
RNU4-41P-201ENST00000364426 NCBP3Q53F19 620 aaKnown RBP7.95□□□□□ -1.14
RNU4-41P-201ENST00000364426 DCAF8L1A6NGE4 600 aa7.85□□□□□ -1.15
RNU4-41P-201ENST00000364426 NPM3O75607 178 aaKnown RBP7.82□□□□□ -1.16
RNU4-41P-201ENST00000364426 DNAJC5BQ9UF47 199 aa7.81□□□□□ -1.16
RNU4-41P-201ENST00000364426 RNF39Q9H2S5 420 aa7.74□□□□□ -1.17
RNU4-41P-201ENST00000364426 KCNA4P22459 653 aa7.72□□□□□ -1.17
RNU4-41P-201ENST00000364426 CACNB1Q02641 598 aaPredicted RBP7.67□□□□□ -1.18
RNU4-41P-201ENST00000364426 C1QBPQ07021 282 aaKnown RBP7.64□□□□□ -1.19
RNU4-41P-201ENST00000364426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.59□□□□□ -1.19
RNU4-41P-201ENST00000364426 U3KPZ7 1027 aaPredicted RBP7.47□□□□□ -1.21
RNU4-41P-201ENST00000364426 SLC4A2P04920 1241 aa7.45□□□□□ -1.22
RNU4-41P-201ENST00000364426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
RNU4-41P-201ENST00000364426 HNRNPUL2Q1KMD3 747 aaKnown RBP7.31□□□□□ -1.24
RNU4-41P-201ENST00000364426 SLC4A1APQ9BWU0 796 aaKnown RBP7.31□□□□□ -1.24
RNU4-41P-201ENST00000364426 APLP2Q06481 763 aa7.3□□□□□ -1.24
RNU4-41P-201ENST00000364426 SPINK5Q9NQ38 1064 aaPredicted RBP7.3□□□□□ -1.24
RNU4-41P-201ENST00000364426 CAPN15O75808 1086 aa7.28□□□□□ -1.24
RNU4-41P-201ENST00000364426 SAMD1Q6SPF0 538 aaPredicted RBP7.27□□□□□ -1.25
RNU4-41P-201ENST00000364426 DSG3P32926 999 aa7.26□□□□□ -1.25
RNU4-41P-201ENST00000364426 MYCNP04198 464 aaPredicted RBP7.24□□□□□ -1.25
RNU4-41P-201ENST00000364426 ZNF219Q9P2Y4 722 aaPredicted RBP7.23□□□□□ -1.25
RNU4-41P-201ENST00000364426 FOXD4L1Q9NU39 408 aa7.22□□□□□ -1.25
RNU4-41P-201ENST00000364426 TRHP20396 242 aaPredicted RBP7.17□□□□□ -1.26
RNU4-41P-201ENST00000364426 ZBTB22O15209 634 aa7.11□□□□□ -1.27
RNU4-41P-201ENST00000364426 ABCB7O75027 752 aa7.1□□□□□ -1.27
RNU4-41P-201ENST00000364426 ATF5Q9Y2D1 282 aaPredicted RBP7.04□□□□□ -1.28
RNU4-41P-201ENST00000364426 ATXN8OSP0DMR3 200 aa7.03□□□□□ -1.28
RNU4-41P-201ENST00000364426 POLA2Q14181 598 aa7.02□□□□□ -1.29
RNU4-41P-201ENST00000364426 RBM42Q9BTD8 480 aaKnown RBP6.94□□□□□ -1.3
RNU4-41P-201ENST00000364426 ZBTB12Q9Y330 459 aaPredicted RBP6.94□□□□□ -1.3
RNU4-41P-201ENST00000364426 CSRNP3Q8WYN3 585 aa6.87□□□□□ -1.31
RNU4-41P-201ENST00000364426 POTEHQ6S545 545 aa6.81□□□□□ -1.32
RNU4-41P-201ENST00000364426 OSCARQ8IYS5 282 aa6.8□□□□□ -1.32
RNU4-41P-201ENST00000364426 AKT1S1Q96B36 256 aa6.8□□□□□ -1.32
RNU4-41P-201ENST00000364426 FBLN2P98095 1184 aa6.77□□□□□ -1.33
RNU4-41P-201ENST00000364426 EHMT2Q96KQ7 1210 aa6.76□□□□□ -1.33
RNU4-41P-201ENST00000364426 SPDYE2BA6NHP3 402 aa6.73□□□□□ -1.33
RNU4-41P-201ENST00000364426 SPDYE6P0CI01 402 aa6.73□□□□□ -1.33
RNU4-41P-201ENST00000364426 MKRN4PQ13434 485 aaPredicted RBP6.73□□□□□ -1.33
RNU4-41P-201ENST00000364426 SPDYE2Q495Y8 402 aa6.73□□□□□ -1.33
RNU4-41P-201ENST00000364426 CHRDL2Q6WN34 429 aa6.73□□□□□ -1.33
RNU4-41P-201ENST00000364426 REM2Q8IYK8 340 aaPredicted RBP6.71□□□□□ -1.34
RNU4-41P-201ENST00000364426 SSUH2Q9Y2M2 353 aa6.66□□□□□ -1.34
RNU4-41P-201ENST00000364426 PITPNM1O00562 1244 aa6.63□□□□□ -1.35
RNU4-41P-201ENST00000364426 ZNF692Q9BU19 519 aaPredicted RBP6.62□□□□□ -1.35
RNU4-41P-201ENST00000364426 FXR2P51116 673 aaKnown RBP eCLIP6.6□□□□□ -1.35
RNU4-41P-201ENST00000364426 PIP4P2Q8N4L2 257 aa6.59□□□□□ -1.35
RNU4-41P-201ENST00000364426 SPDYE1Q8NFV5 336 aaPredicted RBP6.57□□□□□ -1.36
RNU4-41P-201ENST00000364426 PABPN1Q86U42 306 aaKnown RBP eCLIP6.52□□□□□ -1.37
RNU4-41P-201ENST00000364426 CLEC11AQ9Y240 323 aa6.49□□□□□ -1.37
RNU4-41P-201ENST00000364426 SPDYE4A6NLX3 237 aa6.45□□□□□ -1.38
RNU4-41P-201ENST00000364426 PRKAR2AP13861 404 aaKnown RBP6.45□□□□□ -1.38
RNU4-41P-201ENST00000364426 PRR29P0C7W0 189 aa6.44□□□□□ -1.38
RNU4-41P-201ENST00000364426 SP7Q8TDD2 431 aaPredicted RBP6.43□□□□□ -1.38
RNU4-41P-201ENST00000364426 HAX1O00165 279 aa6.41□□□□□ -1.38
RNU4-41P-201ENST00000364426 STAG3Q9UJ98 1225 aa6.41□□□□□ -1.38
RNU4-41P-201ENST00000364426 C19orf67A6NJJ6 358 aa6.38□□□□□ -1.39
RNU4-41P-201ENST00000364426 PROM2Q8N271 834 aa6.38□□□□□ -1.39
RNU4-41P-201ENST00000364426 CHADLQ6NUI6 762 aa6.37□□□□□ -1.39
RNU4-41P-201ENST00000364426 EVX2Q03828 476 aa6.35□□□□□ -1.39
RNU4-41P-201ENST00000364426 FARP1Q9Y4F1 1045 aaPredicted RBP6.33□□□□□ -1.4
RNU4-41P-201ENST00000364426 CREBZFQ9NS37 354 aa6.32□□□□□ -1.4
RNU4-41P-201ENST00000364426 CD44P16070 742 aaKnown RBP6.26□□□□□ -1.41
RNU4-41P-201ENST00000364426 MNX1P50219 401 aaPredicted RBP6.24□□□□□ -1.41
RNU4-41P-201ENST00000364426 CLCN6P51797 869 aa6.24□□□□□ -1.41
RNU4-41P-201ENST00000364426 GABBR2O75899 941 aa6.23□□□□□ -1.41
RNU4-41P-201ENST00000364426 NPM1P06748 294 aaKnown RBP eCLIP6.21□□□□□ -1.42
RNU4-41P-201ENST00000364426 ZNF579Q8NAF0 562 aaKnown RBP6.2□□□□□ -1.42
RNU4-41P-201ENST00000364426 FKBP8Q14318 412 aa6.19□□□□□ -1.42
RNU4-41P-201ENST00000364426 ZRANB1Q9UGI0 708 aa6.17□□□□□ -1.42
RNU4-41P-201ENST00000364426 PAK3O75914 559 aaPredicted RBP6.15□□□□□ -1.42
RNU4-41P-201ENST00000364426 PLEKHG5O94827 1062 aa6.13□□□□□ -1.43
RNU4-41P-201ENST00000364426 MIER1Q8N108 512 aa6.11□□□□□ -1.43
RNU4-41P-201ENST00000364426 POTEIP0CG38 1075 aa6.1□□□□□ -1.43
RNU4-41P-201ENST00000364426 FBXO3Q9UK99 471 aa6.09□□□□□ -1.43
RNU4-41P-201ENST00000364426 GALR2O43603 387 aaPredicted RBP6.08□□□□□ -1.44
RNU4-41P-201ENST00000364426 PLCD3Q8N3E9 789 aa6.08□□□□□ -1.44
RNU4-41P-201ENST00000364426 PHF12Q96QT6 1004 aa6.08□□□□□ -1.44
RNU4-41P-201ENST00000364426 ZBTB47Q9UFB7 747 aaPredicted RBP6.08□□□□□ -1.44
RNU4-41P-201ENST00000364426 CCDC61Q9Y6R9 512 aa6.08□□□□□ -1.44
RNU4-41P-201ENST00000364426 DCBLD2Q96PD2 775 aa6.06□□□□□ -1.44
RNU4-41P-201ENST00000364426 NUBP1P53384 320 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms