RNA–Protein interactions for RNA: ENST00000380557.4

POLR2M-202, Transcript of RNA polymerase II subunit M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2M, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2M-202ENST00000380557 NISCHQ9Y2I1 1504 aa19.56■□□□□ 0.72
POLR2M-202ENST00000380557 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
POLR2M-202ENST00000380557 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
POLR2M-202ENST00000380557 SHROOM4Q9ULL8 1493 aa18.03■□□□□ 0.48
POLR2M-202ENST00000380557 HRCP23327 699 aa18.02■□□□□ 0.47
POLR2M-202ENST00000380557 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
POLR2M-202ENST00000380557 SUPT5HO00267 1087 aaKnown RBP17.93■□□□□ 0.46
POLR2M-202ENST00000380557 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.43
POLR2M-202ENST00000380557 MYT1Q01538 1121 aa17.39■□□□□ 0.37
POLR2M-202ENST00000380557 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
POLR2M-202ENST00000380557 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
POLR2M-202ENST00000380557 LOC105371045A0A1W2PR82 267 aa17.04■□□□□ 0.32
POLR2M-202ENST00000380557 GTF3C3Q9Y5Q9 886 aa17.03■□□□□ 0.32
POLR2M-202ENST00000380557 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
POLR2M-202ENST00000380557 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
POLR2M-202ENST00000380557 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
POLR2M-202ENST00000380557 TRIM26Q12899 539 aaPredicted RBP16.93■□□□□ 0.3
POLR2M-202ENST00000380557 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
POLR2M-202ENST00000380557 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
POLR2M-202ENST00000380557 ACIN1Q9UKV3 1341 aaKnown RBP16.85■□□□□ 0.29
POLR2M-202ENST00000380557 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.28
POLR2M-202ENST00000380557 TTBK1Q5TCY1 1321 aaPredicted RBP16.74■□□□□ 0.27
POLR2M-202ENST00000380557 MYO15BQ96JP2 1530 aa16.71■□□□□ 0.27
POLR2M-202ENST00000380557 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
POLR2M-202ENST00000380557 DIEXFQ68CQ4 756 aaKnown RBP16.6■□□□□ 0.25
POLR2M-202ENST00000380557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.6■□□□□ 0.25
POLR2M-202ENST00000380557 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
POLR2M-202ENST00000380557 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
POLR2M-202ENST00000380557 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
POLR2M-202ENST00000380557 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
POLR2M-202ENST00000380557 BCANQ96GW7 911 aa16.21■□□□□ 0.19
POLR2M-202ENST00000380557 ERICH6Q7L0X2 663 aa16.13■□□□□ 0.17
POLR2M-202ENST00000380557 ANP32EQ9BTT0 268 aa16.12■□□□□ 0.17
POLR2M-202ENST00000380557 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
POLR2M-202ENST00000380557 MIER1Q8N108 512 aa16.06■□□□□ 0.16
POLR2M-202ENST00000380557 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.15
POLR2M-202ENST00000380557 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
POLR2M-202ENST00000380557 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
POLR2M-202ENST00000380557 PRKCSHP14314 528 aaPredicted RBP15.91■□□□□ 0.14
POLR2M-202ENST00000380557 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
POLR2M-202ENST00000380557 SCRIBQ14160 1630 aa15.84■□□□□ 0.13
POLR2M-202ENST00000380557 NEFLP07196 543 aa15.83■□□□□ 0.12
POLR2M-202ENST00000380557 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.12
POLR2M-202ENST00000380557 UBTFP17480 764 aaKnown RBP15.82■□□□□ 0.12
POLR2M-202ENST00000380557 TSHZ2Q9NRE2 1034 aa15.82■□□□□ 0.12
POLR2M-202ENST00000380557 RSF1Q96T23 1441 aaPredicted RBP15.78■□□□□ 0.12
POLR2M-202ENST00000380557 ITGAEP38570 1179 aa15.77■□□□□ 0.11
POLR2M-202ENST00000380557 ABCC9O60706 1549 aa15.74■□□□□ 0.11
POLR2M-202ENST00000380557 FKBP8Q14318 412 aa15.74■□□□□ 0.11
POLR2M-202ENST00000380557 RB1CC1Q8TDY2 1594 aa15.6■□□□□ 0.09
POLR2M-202ENST00000380557 APLP2Q06481 763 aa15.59■□□□□ 0.09
POLR2M-202ENST00000380557 NBR1Q14596 966 aa15.58■□□□□ 0.09
POLR2M-202ENST00000380557 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
POLR2M-202ENST00000380557 RTN4Q9NQC3 1192 aaKnown RBP15.55■□□□□ 0.08
POLR2M-202ENST00000380557 CECR2Q9BXF3 1484 aa15.55■□□□□ 0.08
POLR2M-202ENST00000380557 CCDC136Q96JN2 1154 aa15.54■□□□□ 0.08
POLR2M-202ENST00000380557 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
POLR2M-202ENST00000380557 EIF5BO60841 1220 aaKnown RBP15.5■□□□□ 0.07
POLR2M-202ENST00000380557 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
POLR2M-202ENST00000380557 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
POLR2M-202ENST00000380557 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
POLR2M-202ENST00000380557 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
POLR2M-202ENST00000380557 DEKP35659 375 aaKnown RBP15.44■□□□□ 0.06
POLR2M-202ENST00000380557 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
POLR2M-202ENST00000380557 CLSPNQ9HAW4 1339 aa15.43■□□□□ 0.06
POLR2M-202ENST00000380557 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
POLR2M-202ENST00000380557 KCNH8Q96L42 1107 aa15.39■□□□□ 0.05
POLR2M-202ENST00000380557 MROH2BQ7Z745 1585 aa15.38■□□□□ 0.05
POLR2M-202ENST00000380557 DDX10Q13206 875 aaKnown RBP15.31■□□□□ 0.04
POLR2M-202ENST00000380557 SALL2Q9Y467 1007 aaPredicted RBP15.29■□□□□ 0.04
POLR2M-202ENST00000380557 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
POLR2M-202ENST00000380557 CNGB1Q14028 1251 aaPredicted RBP15.29■□□□□ 0.04
POLR2M-202ENST00000380557 SOGA1O94964 1423 aa15.27■□□□□ 0.03
POLR2M-202ENST00000380557 HIRIP3Q9BW71 556 aaPredicted RBP15.26■□□□□ 0.03
POLR2M-202ENST00000380557 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
POLR2M-202ENST00000380557 WIZO95785 1651 aa15.26■□□□□ 0.03
POLR2M-202ENST00000380557 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
POLR2M-202ENST00000380557 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
POLR2M-202ENST00000380557 MSH5O43196 834 aa15.23■□□□□ 0.03
POLR2M-202ENST00000380557 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
POLR2M-202ENST00000380557 HNRNPUQ00839 825 aaKnown RBP eCLIP15.13■□□□□ 0.01
POLR2M-202ENST00000380557 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
POLR2M-202ENST00000380557 ANP32CO43423 234 aa15.12■□□□□ 0.01
POLR2M-202ENST00000380557 MYT1LQ9UL68 1186 aa15.12■□□□□ 0.01
POLR2M-202ENST00000380557 IL27Q8NEV9 243 aa15.09■□□□□ 0.01
POLR2M-202ENST00000380557 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
POLR2M-202ENST00000380557 ANP32AP39687 249 aaKnown RBP15.06■□□□□ 0
POLR2M-202ENST00000380557 NACADO15069 1562 aa15.05■□□□□ -0
POLR2M-202ENST00000380557 B4GALNT3Q6L9W6 998 aa15.05■□□□□ -0
POLR2M-202ENST00000380557 NOP58Q9Y2X3 529 aaKnown RBP15.05■□□□□ -0
POLR2M-202ENST00000380557 SENP3-EIF4A1A0A087X0R7 540 aa15.04■□□□□ -0
POLR2M-202ENST00000380557 CLIP1P30622 1438 aa15.03■□□□□ -0
POLR2M-202ENST00000380557 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
POLR2M-202ENST00000380557 LAS1LQ9Y4W2 734 aaKnown RBP15.02□□□□□ -0.01
POLR2M-202ENST00000380557 BAZ1AQ9NRL2 1556 aaPredicted RBP15.01□□□□□ -0.01
POLR2M-202ENST00000380557 GOLGA3Q08378 1498 aa14.99□□□□□ -0.01
POLR2M-202ENST00000380557 WRNQ14191 1432 aaPredicted RBP eCLIP14.98□□□□□ -0.01
POLR2M-202ENST00000380557 FAM50AQ14320 339 aaKnown RBP14.96□□□□□ -0.02
POLR2M-202ENST00000380557 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
POLR2M-202ENST00000380557 PAK3O75914 559 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms