RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
PKP1-202ENST00000352845 PELP1Q8IZL8 1130 aaKnown RBP18.41■□□□□ 0.54
PKP1-202ENST00000352845 HRCP23327 699 aa17.99■□□□□ 0.47
PKP1-202ENST00000352845 MYT1Q01538 1121 aa17.96■□□□□ 0.47
PKP1-202ENST00000352845 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
PKP1-202ENST00000352845 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
PKP1-202ENST00000352845 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
PKP1-202ENST00000352845 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.36
PKP1-202ENST00000352845 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
PKP1-202ENST00000352845 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
PKP1-202ENST00000352845 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
PKP1-202ENST00000352845 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
PKP1-202ENST00000352845 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
PKP1-202ENST00000352845 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
PKP1-202ENST00000352845 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
PKP1-202ENST00000352845 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
PKP1-202ENST00000352845 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
PKP1-202ENST00000352845 ABCC9O60706 1549 aa16.75■□□□□ 0.27
PKP1-202ENST00000352845 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
PKP1-202ENST00000352845 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
PKP1-202ENST00000352845 CENPBP07199 599 aaPredicted RBP16.54■□□□□ 0.24
PKP1-202ENST00000352845 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
PKP1-202ENST00000352845 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
PKP1-202ENST00000352845 NACADO15069 1562 aa16.5■□□□□ 0.23
PKP1-202ENST00000352845 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
PKP1-202ENST00000352845 SCRIBQ14160 1630 aa16.49■□□□□ 0.23
PKP1-202ENST00000352845 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
PKP1-202ENST00000352845 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
PKP1-202ENST00000352845 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
PKP1-202ENST00000352845 UNC13AQ9UPW8 1703 aa16.11■□□□□ 0.17
PKP1-202ENST00000352845 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
PKP1-202ENST00000352845 ANP32EQ9BTT0 268 aa16.09■□□□□ 0.17
PKP1-202ENST00000352845 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.17
PKP1-202ENST00000352845 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
PKP1-202ENST00000352845 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
PKP1-202ENST00000352845 ERICH6Q7L0X2 663 aa15.99■□□□□ 0.15
PKP1-202ENST00000352845 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
PKP1-202ENST00000352845 CLSPNQ9HAW4 1339 aa15.98■□□□□ 0.15
PKP1-202ENST00000352845 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
PKP1-202ENST00000352845 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
PKP1-202ENST00000352845 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
PKP1-202ENST00000352845 WIZO95785 1651 aa15.83■□□□□ 0.13
PKP1-202ENST00000352845 BAZ1AQ9NRL2 1556 aaPredicted RBP15.83■□□□□ 0.12
PKP1-202ENST00000352845 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
PKP1-202ENST00000352845 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
PKP1-202ENST00000352845 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
PKP1-202ENST00000352845 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
PKP1-202ENST00000352845 ZNF316A6NFI3 1004 aaPredicted RBP15.75■□□□□ 0.11
PKP1-202ENST00000352845 APLP2Q06481 763 aa15.73■□□□□ 0.11
PKP1-202ENST00000352845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
PKP1-202ENST00000352845 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.1
PKP1-202ENST00000352845 YTHDC1Q96MU7 727 aaKnown RBP15.7■□□□□ 0.1
PKP1-202ENST00000352845 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
PKP1-202ENST00000352845 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
PKP1-202ENST00000352845 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
PKP1-202ENST00000352845 MIER1Q8N108 512 aa15.58■□□□□ 0.08
PKP1-202ENST00000352845 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
PKP1-202ENST00000352845 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.07
PKP1-202ENST00000352845 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
PKP1-202ENST00000352845 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
PKP1-202ENST00000352845 MYT1LQ9UL68 1186 aa15.47■□□□□ 0.07
PKP1-202ENST00000352845 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
PKP1-202ENST00000352845 CEP162Q5TB80 1403 aa15.43■□□□□ 0.06
PKP1-202ENST00000352845 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
PKP1-202ENST00000352845 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
PKP1-202ENST00000352845 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
PKP1-202ENST00000352845 SOGA1O94964 1423 aa15.35■□□□□ 0.05
PKP1-202ENST00000352845 RBM19Q9Y4C8 960 aaKnown RBP15.29■□□□□ 0.04
PKP1-202ENST00000352845 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
PKP1-202ENST00000352845 EEA1Q15075 1411 aa15.25■□□□□ 0.03
PKP1-202ENST00000352845 NCAPD3P42695 1498 aa15.25■□□□□ 0.03
PKP1-202ENST00000352845 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
PKP1-202ENST00000352845 HMGXB3Q12766 1538 aa15.24■□□□□ 0.03
PKP1-202ENST00000352845 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
PKP1-202ENST00000352845 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
PKP1-202ENST00000352845 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
PKP1-202ENST00000352845 MSH5O43196 834 aa15.13■□□□□ 0.01
PKP1-202ENST00000352845 ANO8Q9HCE9 1232 aaPredicted RBP15.13■□□□□ 0.01
PKP1-202ENST00000352845 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
PKP1-202ENST00000352845 UBE2Q2Q8WVN8 375 aa15.12■□□□□ 0.01
PKP1-202ENST00000352845 DEKP35659 375 aaKnown RBP15.11■□□□□ 0.01
PKP1-202ENST00000352845 HNRNPUL2Q1KMD3 747 aaKnown RBP15.1■□□□□ 0.01
PKP1-202ENST00000352845 KIF21BO75037 1637 aa15.09■□□□□ 0.01
PKP1-202ENST00000352845 NEFLP07196 543 aa15.07■□□□□ 0
PKP1-202ENST00000352845 FKBP8Q14318 412 aa15.07■□□□□ 0
PKP1-202ENST00000352845 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
PKP1-202ENST00000352845 SYNJ1O43426 1573 aa15.06■□□□□ 0
PKP1-202ENST00000352845 CLIP1P30622 1438 aa15.04■□□□□ -0
PKP1-202ENST00000352845 VPS8Q8N3P4 1428 aa15.04■□□□□ -0
PKP1-202ENST00000352845 BCANQ96GW7 911 aa15.03■□□□□ -0
PKP1-202ENST00000352845 CFTRP13569 1480 aa14.99□□□□□ -0.01
PKP1-202ENST00000352845 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
PKP1-202ENST00000352845 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
PKP1-202ENST00000352845 TOP2BQ02880 1626 aa14.93□□□□□ -0.02
PKP1-202ENST00000352845 DHX57Q6P158 1386 aaKnown RBP14.93□□□□□ -0.02
PKP1-202ENST00000352845 CDK11AQ9UQ88 783 aaPredicted RBP14.92□□□□□ -0.02
PKP1-202ENST00000352845 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
PKP1-202ENST00000352845 BIVM-ERCC5R4GMW8 1640 aa14.9□□□□□ -0.02
PKP1-202ENST00000352845 CADPSQ9ULU8 1353 aa14.89□□□□□ -0.03
PKP1-202ENST00000352845 CUX1P39880 1505 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms