RNA–Protein interactions for RNA: ENST00000005386.7

RPAP3-201, Transcript of RNA polymerase II associated protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPAP3, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-201ENST00000005386 NISCHQ9Y2I1 1504 aa23.98■■□□□ 1.43
RPAP3-201ENST00000005386 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
RPAP3-201ENST00000005386 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
RPAP3-201ENST00000005386 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
RPAP3-201ENST00000005386 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
RPAP3-201ENST00000005386 ABCC9O60706 1549 aa19.25■□□□□ 0.67
RPAP3-201ENST00000005386 NACADO15069 1562 aa19.24■□□□□ 0.67
RPAP3-201ENST00000005386 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
RPAP3-201ENST00000005386 SCRIBQ14160 1630 aa18.87■□□□□ 0.61
RPAP3-201ENST00000005386 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.6
RPAP3-201ENST00000005386 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
RPAP3-201ENST00000005386 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
RPAP3-201ENST00000005386 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
RPAP3-201ENST00000005386 RSF1Q96T23 1441 aaPredicted RBP18.59■□□□□ 0.57
RPAP3-201ENST00000005386 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
RPAP3-201ENST00000005386 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
RPAP3-201ENST00000005386 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
RPAP3-201ENST00000005386 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
RPAP3-201ENST00000005386 WIZO95785 1651 aa18.43■□□□□ 0.54
RPAP3-201ENST00000005386 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
RPAP3-201ENST00000005386 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
RPAP3-201ENST00000005386 SMARCA2P51531 1590 aa18.18■□□□□ 0.5
RPAP3-201ENST00000005386 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
RPAP3-201ENST00000005386 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
RPAP3-201ENST00000005386 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
RPAP3-201ENST00000005386 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
RPAP3-201ENST00000005386 HMGXB3Q12766 1538 aa17.89■□□□□ 0.46
RPAP3-201ENST00000005386 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
RPAP3-201ENST00000005386 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
RPAP3-201ENST00000005386 BIVM-ERCC5R4GMW8 1640 aa17.75■□□□□ 0.43
RPAP3-201ENST00000005386 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
RPAP3-201ENST00000005386 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
RPAP3-201ENST00000005386 ABCC8Q09428 1581 aa17.58■□□□□ 0.4
RPAP3-201ENST00000005386 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
RPAP3-201ENST00000005386 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
RPAP3-201ENST00000005386 KIF21BO75037 1637 aa17.48■□□□□ 0.39
RPAP3-201ENST00000005386 CFTRP13569 1480 aa17.39■□□□□ 0.38
RPAP3-201ENST00000005386 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
RPAP3-201ENST00000005386 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
RPAP3-201ENST00000005386 EEA1Q15075 1411 aa17.32■□□□□ 0.36
RPAP3-201ENST00000005386 CUX1P39880 1505 aa17.29■□□□□ 0.36
RPAP3-201ENST00000005386 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
RPAP3-201ENST00000005386 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
RPAP3-201ENST00000005386 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
RPAP3-201ENST00000005386 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
RPAP3-201ENST00000005386 SOGA1O94964 1423 aa17.19■□□□□ 0.34
RPAP3-201ENST00000005386 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
RPAP3-201ENST00000005386 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
RPAP3-201ENST00000005386 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
RPAP3-201ENST00000005386 TNIKQ9UKE5 1360 aa17.07■□□□□ 0.32
RPAP3-201ENST00000005386 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
RPAP3-201ENST00000005386 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
RPAP3-201ENST00000005386 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
RPAP3-201ENST00000005386 ABCA5Q8WWZ7 1642 aa17■□□□□ 0.31
RPAP3-201ENST00000005386 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
RPAP3-201ENST00000005386 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.31
RPAP3-201ENST00000005386 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
RPAP3-201ENST00000005386 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
RPAP3-201ENST00000005386 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
RPAP3-201ENST00000005386 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
RPAP3-201ENST00000005386 CUL7Q14999 1698 aa16.88■□□□□ 0.29
RPAP3-201ENST00000005386 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
RPAP3-201ENST00000005386 ABCA10Q8WWZ4 1543 aa16.88■□□□□ 0.29
RPAP3-201ENST00000005386 ARAP1Q96P48 1450 aa16.83■□□□□ 0.29
RPAP3-201ENST00000005386 TOPBP1Q92547 1522 aa16.81■□□□□ 0.28
RPAP3-201ENST00000005386 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
RPAP3-201ENST00000005386 CFAP43Q8NDM7 1665 aa16.81■□□□□ 0.28
RPAP3-201ENST00000005386 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
RPAP3-201ENST00000005386 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
RPAP3-201ENST00000005386 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
RPAP3-201ENST00000005386 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
RPAP3-201ENST00000005386 MAP3K1Q13233 1512 aa16.77■□□□□ 0.28
RPAP3-201ENST00000005386 SAMD9Q5K651 1589 aa16.76■□□□□ 0.27
RPAP3-201ENST00000005386 HRCP23327 699 aa16.76■□□□□ 0.27
RPAP3-201ENST00000005386 POLA1P09884 1462 aaPredicted RBP16.74■□□□□ 0.27
RPAP3-201ENST00000005386 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
RPAP3-201ENST00000005386 NESP48681 1621 aa16.71■□□□□ 0.27
RPAP3-201ENST00000005386 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
RPAP3-201ENST00000005386 TRIM26Q12899 539 aaPredicted RBP16.69■□□□□ 0.26
RPAP3-201ENST00000005386 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
RPAP3-201ENST00000005386 WDR62O43379 1518 aa16.69■□□□□ 0.26
RPAP3-201ENST00000005386 CLIP1P30622 1438 aa16.66■□□□□ 0.26
RPAP3-201ENST00000005386 KIF27Q86VH2 1401 aa16.66■□□□□ 0.26
RPAP3-201ENST00000005386 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
RPAP3-201ENST00000005386 IGF1RP08069 1367 aa16.65■□□□□ 0.26
RPAP3-201ENST00000005386 CUX2O14529 1486 aa16.62■□□□□ 0.25
RPAP3-201ENST00000005386 EFCAB5A4FU69 1503 aa16.59■□□□□ 0.25
RPAP3-201ENST00000005386 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
RPAP3-201ENST00000005386 AQRO60306 1485 aaKnown RBP eCLIP16.56■□□□□ 0.245e-6■■■□□ 16.7
RPAP3-201ENST00000005386 TIAM1Q13009 1591 aa16.54■□□□□ 0.24
RPAP3-201ENST00000005386 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
RPAP3-201ENST00000005386 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
RPAP3-201ENST00000005386 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
RPAP3-201ENST00000005386 RRBP1Q9P2E9 1410 aaKnown RBP16.49■□□□□ 0.23
RPAP3-201ENST00000005386 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
RPAP3-201ENST00000005386 PCGF6Q9BYE7 350 aa16.47■□□□□ 0.23
RPAP3-201ENST00000005386 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
RPAP3-201ENST00000005386 FAM9AQ8IZU1 332 aaPredicted RBP16.43■□□□□ 0.22
RPAP3-201ENST00000005386 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
RPAP3-201ENST00000005386 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms