RNA–Protein interactions for RNA: ENST00000368655.4

GATAD2B-201, Transcript of GATA zinc finger domain containing 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATAD2B, Length 7,478 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATAD2B-201ENST00000368655 NISCHQ9Y2I1 1504 aa21.21■□□□□ 0.99
GATAD2B-201ENST00000368655 DCAF8L2P0C7V8 631 aa20.64■□□□□ 0.89
GATAD2B-201ENST00000368655 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
GATAD2B-201ENST00000368655 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
GATAD2B-201ENST00000368655 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
GATAD2B-201ENST00000368655 APLP2Q06481 763 aa18.36■□□□□ 0.53
GATAD2B-201ENST00000368655 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
GATAD2B-201ENST00000368655 FAM9AQ8IZU1 332 aaPredicted RBP18.28■□□□□ 0.52
GATAD2B-201ENST00000368655 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
GATAD2B-201ENST00000368655 MYT1Q01538 1121 aa18.14■□□□□ 0.49
GATAD2B-201ENST00000368655 ABCC9O60706 1549 aa18.03■□□□□ 0.48
GATAD2B-201ENST00000368655 CCDC180Q9P1Z9 1646 aa18.02■□□□□ 0.47
GATAD2B-201ENST00000368655 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
GATAD2B-201ENST00000368655 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.46
GATAD2B-201ENST00000368655 RANGAP1P46060 587 aaPredicted RBP17.89■□□□□ 0.45
GATAD2B-201ENST00000368655 TTBK1Q5TCY1 1321 aaPredicted RBP17.88■□□□□ 0.45
GATAD2B-201ENST00000368655 ATP1B4Q9UN42 357 aaPredicted RBP17.79■□□□□ 0.44
GATAD2B-201ENST00000368655 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
GATAD2B-201ENST00000368655 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
GATAD2B-201ENST00000368655 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
GATAD2B-201ENST00000368655 ZCCHC6Q5VYS8 1495 aaKnown RBP17.59■□□□□ 0.41
GATAD2B-201ENST00000368655 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
GATAD2B-201ENST00000368655 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
GATAD2B-201ENST00000368655 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
GATAD2B-201ENST00000368655 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
GATAD2B-201ENST00000368655 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
GATAD2B-201ENST00000368655 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
GATAD2B-201ENST00000368655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
GATAD2B-201ENST00000368655 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
GATAD2B-201ENST00000368655 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
GATAD2B-201ENST00000368655 NACADO15069 1562 aa17.2■□□□□ 0.34
GATAD2B-201ENST00000368655 ITGAEP38570 1179 aa17.14■□□□□ 0.33
GATAD2B-201ENST00000368655 HRCP23327 699 aa17.08■□□□□ 0.32
GATAD2B-201ENST00000368655 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
GATAD2B-201ENST00000368655 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.3
GATAD2B-201ENST00000368655 FAM50AQ14320 339 aaKnown RBP16.9■□□□□ 0.3
GATAD2B-201ENST00000368655 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
GATAD2B-201ENST00000368655 NEFLP07196 543 aa16.87■□□□□ 0.29
GATAD2B-201ENST00000368655 YTHDC1Q96MU7 727 aaKnown RBP16.84■□□□□ 0.29
GATAD2B-201ENST00000368655 FBLN2P98095 1184 aa16.83■□□□□ 0.28
GATAD2B-201ENST00000368655 POLR3GLQ9BT43 218 aa16.75■□□□□ 0.27
GATAD2B-201ENST00000368655 ERICH6Q7L0X2 663 aa16.74■□□□□ 0.27
GATAD2B-201ENST00000368655 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
GATAD2B-201ENST00000368655 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
GATAD2B-201ENST00000368655 TRIM52Q96A61 297 aa16.7■□□□□ 0.26
GATAD2B-201ENST00000368655 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
GATAD2B-201ENST00000368655 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
GATAD2B-201ENST00000368655 NEUROD1Q13562 356 aa16.58■□□□□ 0.25
GATAD2B-201ENST00000368655 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.24
GATAD2B-201ENST00000368655 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
GATAD2B-201ENST00000368655 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.24
GATAD2B-201ENST00000368655 EEA1Q15075 1411 aa16.51■□□□□ 0.23
GATAD2B-201ENST00000368655 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
GATAD2B-201ENST00000368655 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
GATAD2B-201ENST00000368655 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
GATAD2B-201ENST00000368655 CECR2Q9BXF3 1484 aa16.45■□□□□ 0.22
GATAD2B-201ENST00000368655 WRNQ14191 1432 aaPredicted RBP eCLIP16.44■□□□□ 0.22
GATAD2B-201ENST00000368655 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
GATAD2B-201ENST00000368655 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
GATAD2B-201ENST00000368655 ZNF777Q9ULD5 760 aaPredicted RBP16.4■□□□□ 0.22
GATAD2B-201ENST00000368655 WIZO95785 1651 aa16.38■□□□□ 0.21
GATAD2B-201ENST00000368655 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
GATAD2B-201ENST00000368655 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
GATAD2B-201ENST00000368655 CLIP1P30622 1438 aa16.36■□□□□ 0.21
GATAD2B-201ENST00000368655 KIF27Q86VH2 1401 aa16.35■□□□□ 0.21
GATAD2B-201ENST00000368655 ZNF326Q5BKZ1 582 aaKnown RBP16.35■□□□□ 0.21
GATAD2B-201ENST00000368655 ANP32CO43423 234 aa16.34■□□□□ 0.21
GATAD2B-201ENST00000368655 ZNF316A6NFI3 1004 aaPredicted RBP16.33■□□□□ 0.21
GATAD2B-201ENST00000368655 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
GATAD2B-201ENST00000368655 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
GATAD2B-201ENST00000368655 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
GATAD2B-201ENST00000368655 ERCC6Q03468 1493 aa16.28■□□□□ 0.2
GATAD2B-201ENST00000368655 MTUS2Q5JR59 1369 aa16.28■□□□□ 0.2
GATAD2B-201ENST00000368655 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
GATAD2B-201ENST00000368655 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
GATAD2B-201ENST00000368655 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
GATAD2B-201ENST00000368655 DAXXQ9UER7 740 aaPredicted RBP16.24■□□□□ 0.19
GATAD2B-201ENST00000368655 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
GATAD2B-201ENST00000368655 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
GATAD2B-201ENST00000368655 TNIKQ9UKE5 1360 aa16.2■□□□□ 0.18
GATAD2B-201ENST00000368655 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
GATAD2B-201ENST00000368655 BCANQ96GW7 911 aa16.16■□□□□ 0.18
GATAD2B-201ENST00000368655 ESF1Q9H501 851 aaKnown RBP16.15■□□□□ 0.18
GATAD2B-201ENST00000368655 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
GATAD2B-201ENST00000368655 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
GATAD2B-201ENST00000368655 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
GATAD2B-201ENST00000368655 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
GATAD2B-201ENST00000368655 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
GATAD2B-201ENST00000368655 CUX2O14529 1486 aa16.09■□□□□ 0.17
GATAD2B-201ENST00000368655 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
GATAD2B-201ENST00000368655 PLEKHD1A6NEE1 506 aa16.05■□□□□ 0.16
GATAD2B-201ENST00000368655 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
GATAD2B-201ENST00000368655 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
GATAD2B-201ENST00000368655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.162e-8■■□□□ 14.4
GATAD2B-201ENST00000368655 CARMIL1Q5VZK9 1371 aa16.03■□□□□ 0.16
GATAD2B-201ENST00000368655 CLSPNQ9HAW4 1339 aa16.03■□□□□ 0.16
GATAD2B-201ENST00000368655 SOGA1O94964 1423 aa16.02■□□□□ 0.16
GATAD2B-201ENST00000368655 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.16
GATAD2B-201ENST00000368655 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
GATAD2B-201ENST00000368655 NEFMP07197 916 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms