RNA–Protein interactions for RNA: ENST00000443377.1

AP000350.1-201, humanhuman

BASIC

Gene AP000350.1, Length 532 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000350.1-201ENST00000443377 NISCHQ9Y2I1 1504 aa28.78■■■□□ 2.2
AP000350.1-201ENST00000443377 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
AP000350.1-201ENST00000443377 ABCC9O60706 1549 aa25.24■■□□□ 1.63
AP000350.1-201ENST00000443377 RB1CC1Q8TDY2 1594 aa24.22■■□□□ 1.47
AP000350.1-201ENST00000443377 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
AP000350.1-201ENST00000443377 NACADO15069 1562 aa24.15■■□□□ 1.46
AP000350.1-201ENST00000443377 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
AP000350.1-201ENST00000443377 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
AP000350.1-201ENST00000443377 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
AP000350.1-201ENST00000443377 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
AP000350.1-201ENST00000443377 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
AP000350.1-201ENST00000443377 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
AP000350.1-201ENST00000443377 SCRIBQ14160 1630 aa23.41■■□□□ 1.34
AP000350.1-201ENST00000443377 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
AP000350.1-201ENST00000443377 SHROOM4Q9ULL8 1493 aa23.21■■□□□ 1.31
AP000350.1-201ENST00000443377 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
AP000350.1-201ENST00000443377 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
AP000350.1-201ENST00000443377 CECR2Q9BXF3 1484 aa22.69■■□□□ 1.22
AP000350.1-201ENST00000443377 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
AP000350.1-201ENST00000443377 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
AP000350.1-201ENST00000443377 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
AP000350.1-201ENST00000443377 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
AP000350.1-201ENST00000443377 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
AP000350.1-201ENST00000443377 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
AP000350.1-201ENST00000443377 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
AP000350.1-201ENST00000443377 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
AP000350.1-201ENST00000443377 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
AP000350.1-201ENST00000443377 WIZO95785 1651 aa21.95■■□□□ 1.1
AP000350.1-201ENST00000443377 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
AP000350.1-201ENST00000443377 NESP48681 1621 aa21.8■■□□□ 1.08
AP000350.1-201ENST00000443377 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
AP000350.1-201ENST00000443377 LAMC3Q9Y6N6 1575 aa21.72■■□□□ 1.07
AP000350.1-201ENST00000443377 TOP2AP11388 1531 aaKnown RBP21.7■■□□□ 1.07
AP000350.1-201ENST00000443377 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
AP000350.1-201ENST00000443377 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
AP000350.1-201ENST00000443377 CUX2O14529 1486 aa21.58■■□□□ 1.04
AP000350.1-201ENST00000443377 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
AP000350.1-201ENST00000443377 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
AP000350.1-201ENST00000443377 CFTRP13569 1480 aa21.46■■□□□ 1.03
AP000350.1-201ENST00000443377 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
AP000350.1-201ENST00000443377 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.02
AP000350.1-201ENST00000443377 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
AP000350.1-201ENST00000443377 MRC2Q9UBG0 1479 aa21.37■■□□□ 1.01
AP000350.1-201ENST00000443377 PRDM2Q13029 1718 aa21.3■■□□□ 1
AP000350.1-201ENST00000443377 WDR62O43379 1518 aa21.29■■□□□ 1
AP000350.1-201ENST00000443377 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
AP000350.1-201ENST00000443377 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
AP000350.1-201ENST00000443377 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
AP000350.1-201ENST00000443377 TOPBP1Q92547 1522 aa21.04■□□□□ 0.96
AP000350.1-201ENST00000443377 ABCC8Q09428 1581 aa21.02■□□□□ 0.95
AP000350.1-201ENST00000443377 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
AP000350.1-201ENST00000443377 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
AP000350.1-201ENST00000443377 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
AP000350.1-201ENST00000443377 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
AP000350.1-201ENST00000443377 CUX1P39880 1505 aa20.82■□□□□ 0.92
AP000350.1-201ENST00000443377 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
AP000350.1-201ENST00000443377 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
AP000350.1-201ENST00000443377 SOGA1O94964 1423 aa20.77■□□□□ 0.91
AP000350.1-201ENST00000443377 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
AP000350.1-201ENST00000443377 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
AP000350.1-201ENST00000443377 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.91
AP000350.1-201ENST00000443377 OSCARQ8IYS5 282 aa20.67■□□□□ 0.9
AP000350.1-201ENST00000443377 TDRD9Q8NDG6 1382 aaKnown RBP20.67■□□□□ 0.9
AP000350.1-201ENST00000443377 WRNQ14191 1432 aaPredicted RBP eCLIP20.65■□□□□ 0.9
AP000350.1-201ENST00000443377 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
AP000350.1-201ENST00000443377 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
AP000350.1-201ENST00000443377 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
AP000350.1-201ENST00000443377 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
AP000350.1-201ENST00000443377 ABCA10Q8WWZ4 1543 aa20.56■□□□□ 0.88
AP000350.1-201ENST00000443377 CHD1O14646 1710 aa20.53■□□□□ 0.88
AP000350.1-201ENST00000443377 FBLN2P98095 1184 aa20.53■□□□□ 0.88
AP000350.1-201ENST00000443377 GRIN2BQ13224 1484 aa20.53■□□□□ 0.88
AP000350.1-201ENST00000443377 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
AP000350.1-201ENST00000443377 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
AP000350.1-201ENST00000443377 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
AP000350.1-201ENST00000443377 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
AP000350.1-201ENST00000443377 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
AP000350.1-201ENST00000443377 CHMP7Q8WUX9 453 aaPredicted RBP20.43■□□□□ 0.86
AP000350.1-201ENST00000443377 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
AP000350.1-201ENST00000443377 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
AP000350.1-201ENST00000443377 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
AP000350.1-201ENST00000443377 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
AP000350.1-201ENST00000443377 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
AP000350.1-201ENST00000443377 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
AP000350.1-201ENST00000443377 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
AP000350.1-201ENST00000443377 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
AP000350.1-201ENST00000443377 CLASP1Q7Z460 1538 aa20.29■□□□□ 0.84
AP000350.1-201ENST00000443377 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
AP000350.1-201ENST00000443377 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
AP000350.1-201ENST00000443377 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
AP000350.1-201ENST00000443377 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
AP000350.1-201ENST00000443377 NUP160Q12769 1436 aa20.17■□□□□ 0.82
AP000350.1-201ENST00000443377 CYB5RLQ6IPT4 315 aa20.16■□□□□ 0.82
AP000350.1-201ENST00000443377 IGF1RP08069 1367 aa20.15■□□□□ 0.82
AP000350.1-201ENST00000443377 ARAP1Q96P48 1450 aa20.15■□□□□ 0.82
AP000350.1-201ENST00000443377 CUL7Q14999 1698 aa20.12■□□□□ 0.81
AP000350.1-201ENST00000443377 SHROOM2Q13796 1616 aa20.04■□□□□ 0.8
AP000350.1-201ENST00000443377 CARMIL1Q5VZK9 1371 aa20.04■□□□□ 0.8
AP000350.1-201ENST00000443377 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
AP000350.1-201ENST00000443377 ERCC6L2Q5T890 1561 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms