Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM248Q9NWD8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM248Q9NWD8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM248Q9NWD8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM248Q9NWD8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM248Q9NWD8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM248Q9NWD8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM248Q9NWD8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 AFG3L1P-217ENST00000557444 2447 ntBASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TMEM248Q9NWD8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 HTR7P1-201ENST00000538670 1336 ntBASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEM248Q9NWD8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM248Q9NWD8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 AL353807.1-201ENST00000427475 662 ntBASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 AL353708.3-201ENST00000610272 989 ntBASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM248Q9NWD8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM248Q9NWD8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.02■□□□□ 0.79
TMEM248Q9NWD8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.02■□□□□ 0.79
TMEM248Q9NWD8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms