Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.74■□□□□ 0.43
CROCCP3Q8IVE0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 AL691432.2-201ENST00000607222 2038 ntBASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CROCCP3Q8IVE0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 WIZP1-201ENST00000531444 2299 ntBASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.72■□□□□ 0.43
CROCCP3Q8IVE0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 AL356740.2-201ENST00000601559 647 ntBASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CROCCP3Q8IVE0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.71■□□□□ 0.42
CROCCP3Q8IVE0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.71■□□□□ 0.42
CROCCP3Q8IVE0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CROCCP3Q8IVE0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CROCCP3Q8IVE0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.7■□□□□ 0.42
CROCCP3Q8IVE0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms