Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 NEU1-209ENST00000495807 4616 ntTSL 212.79□□□□□ -0.361e-6■■□□□ 14.5
LARP4Q71RC2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.322e-7■■□□□ 14.5
LARP4Q71RC2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.332e-7■■□□□ 14.5
LARP4Q71RC2 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.692e-7■■□□□ 14.5
LARP4Q71RC2 NACA-215ENST00000550920 752 ntTSL 59.42□□□□□ -0.92e-7■■□□□ 14.5
LARP4Q71RC2 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.072e-7■■□□□ 14.5
LARP4Q71RC2 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.94□□□□□ -1.142e-7■■□□□ 14.5
LARP4Q71RC2 NACA-208ENST00000547914 543 ntTSL 57.11□□□□□ -1.272e-7■■□□□ 14.5
LARP4Q71RC2 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.85□□□□□ -1.312e-7■■□□□ 14.5
LARP4Q71RC2 NACA-210ENST00000548386 644 ntTSL 25.43□□□□□ -1.542e-7■■□□□ 14.5
LARP4Q71RC2 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.61□□□□□ -1.672e-7■■□□□ 14.5
LARP4Q71RC2 RPL27-208ENST00000593262 1872 ntTSL 219.36■□□□□ 0.696e-16■■□□□ 14.5
LARP4Q71RC2 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.996e-16■■□□□ 14.5
LARP4Q71RC2 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.186e-16■■□□□ 14.5
LARP4Q71RC2 RPL27-204ENST00000588830 318 ntTSL 27.29□□□□□ -1.246e-16■■□□□ 14.5
LARP4Q71RC2 HMGN2-205ENST00000466194 952 ntTSL 216.52■□□□□ 0.244e-19■■□□□ 14.5
LARP4Q71RC2 HMGN2-202ENST00000460563 1045 ntTSL 59.76□□□□□ -0.854e-19■■□□□ 14.5
LARP4Q71RC2 HMGN2-203ENST00000463817 853 ntTSL 28.35□□□□□ -1.074e-19■■□□□ 14.5
LARP4Q71RC2 HMGN2-206ENST00000467700 932 ntTSL 27.88□□□□□ -1.154e-19■■□□□ 14.5
LARP4Q71RC2 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.324e-19■■□□□ 14.5
LARP4Q71RC2 HMGN2-209ENST00000493418 1496 ntTSL 26.49□□□□□ -1.374e-19■■□□□ 14.5
LARP4Q71RC2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.444e-19■■□□□ 14.5
LARP4Q71RC2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.342e-7■■□□□ 14.5
LARP4Q71RC2 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.482e-7■■□□□ 14.5
LARP4Q71RC2 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC11.45□□□□□ -0.582e-7■■□□□ 14.5
LARP4Q71RC2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.241e-12■■□□□ 14.5
LARP4Q71RC2 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.63□□□□□ -0.391e-12■■□□□ 14.5
LARP4Q71RC2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.453e-7■■□□□ 14.5
LARP4Q71RC2 ENTPD2-203ENST00000460614 1427 ntTSL 1 (best)16.42■□□□□ 0.223e-7■■□□□ 14.5
LARP4Q71RC2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.034e-6■■□□□ 14.5
LARP4Q71RC2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.624e-6■■□□□ 14.5
LARP4Q71RC2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.374e-6■■□□□ 14.5
LARP4Q71RC2 SSR2-211ENST00000484320 1148 ntTSL 514.29□□□□□ -0.125e-8■■□□□ 14.5
LARP4Q71RC2 SSR2-209ENST00000480176 1040 ntTSL 212.62□□□□□ -0.395e-8■■□□□ 14.5
LARP4Q71RC2 SSR2-218ENST00000532074 1008 ntTSL 59.7□□□□□ -0.865e-8■■□□□ 14.5
LARP4Q71RC2 SSR2-213ENST00000496742 825 ntTSL 3 BASIC9.47□□□□□ -0.895e-8■■□□□ 14.5
LARP4Q71RC2 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.025e-8■■□□□ 14.5
LARP4Q71RC2 SSR2-205ENST00000472467 1833 ntTSL 28.31□□□□□ -1.085e-8■■□□□ 14.5
LARP4Q71RC2 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.78□□□□□ -1.165e-8■■□□□ 14.5
LARP4Q71RC2 SSR2-212ENST00000488179 1712 ntTSL 57.63□□□□□ -1.195e-8■■□□□ 14.5
LARP4Q71RC2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.855e-9■■□□□ 14.5
LARP4Q71RC2 FBXO2-206ENST00000642025 2215 nt19.6■□□□□ 0.735e-9■■□□□ 14.5
LARP4Q71RC2 TIMM50-208ENST00000597552 369 ntTSL 29.11□□□□□ -0.952e-6■■□□□ 14.5
LARP4Q71RC2 SND1-214ENST00000489417 1447 ntTSL 220.14■□□□□ 0.818e-8■■□□□ 14.5
LARP4Q71RC2 VASP-202ENST00000586014 1725 ntTSL 518.66■□□□□ 0.581e-7■■□□□ 14.5
LARP4Q71RC2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.181e-7■■□□□ 14.5
LARP4Q71RC2 RPL10-217ENST00000492572 1656 ntTSL 516.75■□□□□ 0.276e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC12.69□□□□□ -0.386e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-210ENST00000458500 585 ntTSL 1 (best)12.14□□□□□ -0.476e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-204ENST00000424325 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.476e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-212ENST00000479366 569 ntTSL 412.05□□□□□ -0.486e-72■■□□□ 14.4
LARP4Q71RC2 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.486e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-215ENST00000489200 1519 ntTSL 211.35□□□□□ -0.596e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-207ENST00000436473 657 ntTSL 211.07□□□□□ -0.646e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-201ENST00000344746 2278 ntAPPRIS P1 TSL 1 (best)11.06□□□□□ -0.646e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-213ENST00000482732 1731 ntTSL 1 (best)11.01□□□□□ -0.656e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-214ENST00000485196 839 ntTSL 210.77□□□□□ -0.696e-56■■□□□ 14.4
LARP4Q71RC2 RPL10-216ENST00000491035 1369 ntTSL 510.32□□□□□ -0.766e-56■■□□□ 14.4
LARP4Q71RC2 ECI1-205ENST00000563447 965 ntTSL 214.81□□□□□ -0.042e-8■■□□□ 14.4
LARP4Q71RC2 MYL6-204ENST00000546630 544 ntTSL 1 (best)13.77□□□□□ -0.212e-8■■□□□ 14.4
LARP4Q71RC2 MYL6B-203ENST00000548571 223 ntTSL 47.91□□□□□ -1.142e-8■■□□□ 14.4
LARP4Q71RC2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.62■□□□□ 0.416e-13■■□□□ 14.4
LARP4Q71RC2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.58■□□□□ 0.246e-13■■□□□ 14.4
LARP4Q71RC2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.65■□□□□ 0.16e-13■■□□□ 14.4
LARP4Q71RC2 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.29□□□□□ -1.086e-13■■□□□ 14.4
LARP4Q71RC2 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.18□□□□□ -1.16e-13■■□□□ 14.4
LARP4Q71RC2 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.16e-13■■□□□ 14.4
LARP4Q71RC2 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.186e-13■■□□□ 14.4
LARP4Q71RC2 MAP4K4-207ENST00000417294 4251 ntTSL 56.15□□□□□ -1.426e-13■■□□□ 14.4
LARP4Q71RC2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.045e-13■■□□□ 14.4
LARP4Q71RC2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.135e-13■■□□□ 14.4
LARP4Q71RC2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.42□□□□□ -0.265e-13■■□□□ 14.4
LARP4Q71RC2 CBX3-206ENST00000481057 860 ntTSL 28.15□□□□□ -1.15e-13■■□□□ 14.4
LARP4Q71RC2 MARCH3-202ENST00000502289 764 ntTSL 417.88■□□□□ 0.452e-7■■□□□ 14.4
LARP4Q71RC2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.56■□□□□ 0.43e-9■■□□□ 14.4
LARP4Q71RC2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.273e-9■■□□□ 14.4
LARP4Q71RC2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.73■□□□□ 0.273e-9■■□□□ 14.4
LARP4Q71RC2 RABAC1-206ENST00000600292 653 ntTSL 215.79■□□□□ 0.123e-9■■□□□ 14.4
LARP4Q71RC2 RABAC1-207ENST00000601028 530 ntTSL 213.49□□□□□ -0.253e-9■■□□□ 14.4
LARP4Q71RC2 TUBA1B-201ENST00000332858 3198 ntTSL 1 (best)13.45□□□□□ -0.262e-22■■□□□ 14.4
LARP4Q71RC2 TUBA1B-204ENST00000547765 1875 ntTSL 513.33□□□□□ -0.282e-22■■□□□ 14.4
LARP4Q71RC2 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.322e-22■■□□□ 14.4
LARP4Q71RC2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.041e-20■■□□□ 14.4
LARP4Q71RC2 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.289e-7■■□□□ 14.4
LARP4Q71RC2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.93■■□□□ 1.422e-6■■□□□ 14.4
LARP4Q71RC2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.16■□□□□ 0.822e-6■■□□□ 14.4
LARP4Q71RC2 SAE1-207ENST00000596995 2106 ntTSL 218.89■□□□□ 0.622e-6■■□□□ 14.4
LARP4Q71RC2 SAE1-204ENST00000414294 2211 ntTSL 218.49■□□□□ 0.552e-6■■□□□ 14.4
LARP4Q71RC2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.542e-6■■□□□ 14.4
LARP4Q71RC2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.98■□□□□ 0.152e-6■■□□□ 14.4
LARP4Q71RC2 ATP5D-204ENST00000589478 640 ntTSL 217.89■□□□□ 0.459e-9■■□□□ 14.4
LARP4Q71RC2 ATP5D-209ENST00000614837 343 ntTSL 214.02□□□□□ -0.179e-9■■□□□ 14.4
LARP4Q71RC2 ATP5L-203ENST00000527186 1582 ntTSL 24.7□□□□□ -1.662e-10■■□□□ 14.4
LARP4Q71RC2 HDGF-204ENST00000465180 2060 ntTSL 1 (best)14.93□□□□□ -0.025e-9■■□□□ 14.4
LARP4Q71RC2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.021e-6■■□□□ 14.4
LARP4Q71RC2 NDUFS8-204ENST00000524810 616 ntTSL 214.37□□□□□ -0.111e-6■■□□□ 14.4
LARP4Q71RC2 NDUFS8-210ENST00000528492 353 ntTSL 1 (best) BASIC10.61□□□□□ -0.711e-6■■□□□ 14.4
LARP4Q71RC2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.87■□□□□ 0.612e-6■■□□□ 14.4
LARP4Q71RC2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.592e-6■■□□□ 14.4
LARP4Q71RC2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.272e-6■■□□□ 14.4
Retrieved 100 of 15,922 protein–RNA pairs in 160.9 ms