RNA–Protein interactions for RNA: ENST00000502289.1

MARCH3-202, Transcript of membrane associated ring-CH-type finger 3, humanhuman

TSL 4

Gene MARCH3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH3-202ENST00000502289 NISCHQ9Y2I1 1504 aa47.61■■■■■ 5.21
MARCH3-202ENST00000502289 CCDC180Q9P1Z9 1646 aa42.33■■■■■ 4.37
MARCH3-202ENST00000502289 ABCC9O60706 1549 aa41.67■■■■■ 4.26
MARCH3-202ENST00000502289 DCAF8L2P0C7V8 631 aa39.96■■■■□ 3.99
MARCH3-202ENST00000502289 RB1CC1Q8TDY2 1594 aa39.96■■■■□ 3.99
MARCH3-202ENST00000502289 NACADO15069 1562 aa39.87■■■■□ 3.97
MARCH3-202ENST00000502289 ZCCHC6Q5VYS8 1495 aaKnown RBP39.61■■■■□ 3.93
MARCH3-202ENST00000502289 MYO15BQ96JP2 1530 aa39.55■■■■□ 3.92
MARCH3-202ENST00000502289 DCAF1Q9Y4B6 1507 aa39.35■■■■□ 3.89
MARCH3-202ENST00000502289 UNC13AQ9UPW8 1703 aa39.01■■■■□ 3.84
MARCH3-202ENST00000502289 PABPN1Q86U42 306 aaKnown RBP eCLIP38.96■■■■□ 3.83
MARCH3-202ENST00000502289 BICRAQ9NZM4 1560 aa38.76■■■■□ 3.8
MARCH3-202ENST00000502289 SCRIBQ14160 1630 aa38.68■■■■□ 3.78
MARCH3-202ENST00000502289 DNAJC5BQ9UF47 199 aa38.43■■■■□ 3.74
MARCH3-202ENST00000502289 SHROOM4Q9ULL8 1493 aa38.29■■■■□ 3.72
MARCH3-202ENST00000502289 EIF4G1Q04637 1599 aaKnown RBP37.75■■■■□ 3.63
MARCH3-202ENST00000502289 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
MARCH3-202ENST00000502289 CECR2Q9BXF3 1484 aa37.45■■■■□ 3.59
MARCH3-202ENST00000502289 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
MARCH3-202ENST00000502289 BAZ1AQ9NRL2 1556 aaPredicted RBP36.89■■■■□ 3.5
MARCH3-202ENST00000502289 ATAD2BQ9ULI0 1458 aa36.82■■■■□ 3.49
MARCH3-202ENST00000502289 NCAPD3P42695 1498 aa36.82■■■■□ 3.48
MARCH3-202ENST00000502289 SMARCA2P51531 1590 aa36.74■■■■□ 3.47
MARCH3-202ENST00000502289 MROH2BQ7Z745 1585 aa36.7■■■■□ 3.47
MARCH3-202ENST00000502289 HMGXB3Q12766 1538 aa36.59■■■■□ 3.45
MARCH3-202ENST00000502289 PEG3Q9GZU2 1588 aa36.57■■■■□ 3.45
MARCH3-202ENST00000502289 BAZ1BQ9UIG0 1483 aaKnown RBP36.51■■■■□ 3.44
MARCH3-202ENST00000502289 WIZO95785 1651 aa36.29■■■■□ 3.4
MARCH3-202ENST00000502289 RSF1Q96T23 1441 aaPredicted RBP36.24■■■■□ 3.39
MARCH3-202ENST00000502289 NESP48681 1621 aa36.01■■■■□ 3.35
MARCH3-202ENST00000502289 ERCC6Q03468 1493 aa35.92■■■■□ 3.34
MARCH3-202ENST00000502289 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
MARCH3-202ENST00000502289 LAMC3Q9Y6N6 1575 aa35.84■■■■□ 3.33
MARCH3-202ENST00000502289 CADPSQ9ULU8 1353 aa35.76■■■■□ 3.31
MARCH3-202ENST00000502289 PDS5BQ9NTI5 1447 aa35.65■■■■□ 3.3
MARCH3-202ENST00000502289 CUX2O14529 1486 aa35.55■■■■□ 3.28
MARCH3-202ENST00000502289 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
MARCH3-202ENST00000502289 CCDC88BA6NC98 1476 aa35.5■■■■□ 3.27
MARCH3-202ENST00000502289 CFTRP13569 1480 aa35.49■■■■□ 3.27
MARCH3-202ENST00000502289 THOC2Q8NI27 1593 aaKnown RBP35.43■■■■□ 3.26
MARCH3-202ENST00000502289 FANCD2Q9BXW9 1451 aa35.34■■■■□ 3.25
MARCH3-202ENST00000502289 CEP164Q9UPV0 1460 aa35.3■■■■□ 3.24
MARCH3-202ENST00000502289 SUPT5HO00267 1087 aaKnown RBP35.29■■■■□ 3.24
MARCH3-202ENST00000502289 MRC2Q9UBG0 1479 aa35.28■■■■□ 3.24
MARCH3-202ENST00000502289 WDR62O43379 1518 aa35.15■■■■□ 3.22
MARCH3-202ENST00000502289 PRDM2Q13029 1718 aa35.13■■■■□ 3.21
MARCH3-202ENST00000502289 URB2Q14146 1524 aaKnown RBP35■■■■□ 3.19
MARCH3-202ENST00000502289 TOPBP1Q92547 1522 aa34.75■■■■□ 3.15
MARCH3-202ENST00000502289 ABCC8Q09428 1581 aa34.72■■■■□ 3.15
MARCH3-202ENST00000502289 DNAJC5Q9H3Z4 198 aa34.71■■■■□ 3.15
MARCH3-202ENST00000502289 DNMBPQ6XZF7 1577 aa34.67■■■■□ 3.14
MARCH3-202ENST00000502289 IFT140Q96RY7 1462 aa34.57■■■■□ 3.12
MARCH3-202ENST00000502289 POLA1P09884 1462 aaPredicted RBP34.45■■■■□ 3.1
MARCH3-202ENST00000502289 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.1
MARCH3-202ENST00000502289 CUX1P39880 1505 aa34.44■■■■□ 3.1
MARCH3-202ENST00000502289 TARBP1Q13395 1621 aaKnown RBP34.36■■■■□ 3.09
MARCH3-202ENST00000502289 FGD5Q6ZNL6 1462 aa34.34■■■■□ 3.09
MARCH3-202ENST00000502289 RAD54L2Q9Y4B4 1467 aa34.33■■■■□ 3.09
MARCH3-202ENST00000502289 SOGA1O94964 1423 aa34.33■■■■□ 3.09
MARCH3-202ENST00000502289 EIF4G3O43432 1585 aaKnown RBP34.26■■■■□ 3.07
MARCH3-202ENST00000502289 AQRO60306 1485 aaKnown RBP eCLIP34.25■■■■□ 3.073e-7■■■■■ 30.5
MARCH3-202ENST00000502289 TDRD9Q8NDG6 1382 aaKnown RBP34.18■■■■□ 3.06
MARCH3-202ENST00000502289 WRNQ14191 1432 aaPredicted RBP eCLIP34.17■■■■□ 3.06
MARCH3-202ENST00000502289 OSCARQ8IYS5 282 aa34.13■■■■□ 3.05
MARCH3-202ENST00000502289 TOP2BQ02880 1626 aa34.08■■■■□ 3.05
MARCH3-202ENST00000502289 SYNJ1O43426 1573 aa34.07■■■■□ 3.05
MARCH3-202ENST00000502289 BIVM-ERCC5R4GMW8 1640 aa34.05■■■■□ 3.04
MARCH3-202ENST00000502289 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
MARCH3-202ENST00000502289 ABCA10Q8WWZ4 1543 aa33.99■■■■□ 3.03
MARCH3-202ENST00000502289 GRIN2BQ13224 1484 aa33.93■■■■□ 3.02
MARCH3-202ENST00000502289 FBLN2P98095 1184 aa33.92■■■■□ 3.02
MARCH3-202ENST00000502289 GAPVD1Q14C86 1478 aa33.91■■■■□ 3.02
MARCH3-202ENST00000502289 SNAPC4Q5SXM2 1469 aa33.9■■■■□ 3.02
MARCH3-202ENST00000502289 CHD1O14646 1710 aa33.85■■■■□ 3.01
MARCH3-202ENST00000502289 ABCA5Q8WWZ7 1642 aa33.85■■■■□ 3.01
MARCH3-202ENST00000502289 MAGI1Q96QZ7 1491 aaPredicted RBP33.83■■■■□ 3.01
MARCH3-202ENST00000502289 PBRM1Q86U86 1689 aa33.8■■■■□ 3
MARCH3-202ENST00000502289 CHMP7Q8WUX9 453 aaPredicted RBP33.78■■■■□ 3
MARCH3-202ENST00000502289 SYNJ2O15056 1496 aa33.71■■■□□ 2.99
MARCH3-202ENST00000502289 ERICH3Q5RHP9 1530 aa33.58■■■□□ 2.97
MARCH3-202ENST00000502289 TRIM41Q8WV44 630 aa33.55■■■□□ 2.96
MARCH3-202ENST00000502289 ADAMTS12P58397 1594 aa33.54■■■□□ 2.96
MARCH3-202ENST00000502289 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
MARCH3-202ENST00000502289 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
MARCH3-202ENST00000502289 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
MARCH3-202ENST00000502289 ARHGEF11O15085 1522 aa33.52■■■□□ 2.96
MARCH3-202ENST00000502289 FHAD1B1AJZ9 1412 aa33.52■■■□□ 2.96
MARCH3-202ENST00000502289 CLASP1Q7Z460 1538 aa33.49■■■□□ 2.95
MARCH3-202ENST00000502289 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
MARCH3-202ENST00000502289 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
MARCH3-202ENST00000502289 IGF1RP08069 1367 aa33.37■■■□□ 2.93
MARCH3-202ENST00000502289 NUP160Q12769 1436 aa33.34■■■□□ 2.93
MARCH3-202ENST00000502289 CEP170Q5SW79 1584 aa33.31■■■□□ 2.92
MARCH3-202ENST00000502289 CYB5RLQ6IPT4 315 aa33.3■■■□□ 2.92
MARCH3-202ENST00000502289 ARAP1Q96P48 1450 aa33.25■■■□□ 2.91
MARCH3-202ENST00000502289 CUL7Q14999 1698 aa33.22■■■□□ 2.91
MARCH3-202ENST00000502289 CARMIL1Q5VZK9 1371 aa33.18■■■□□ 2.9
MARCH3-202ENST00000502289 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
MARCH3-202ENST00000502289 SHROOM2Q13796 1616 aa33.07■■■□□ 2.88
MARCH3-202ENST00000502289 JPH4Q96JJ6 628 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms