RNA–Protein interactions for RNA: ENST00000597552.1

TIMM50-208, Transcript of translocase of inner mitochondrial membrane 50, humanhuman

TSL 2

Gene TIMM50, Length 369 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM50-208ENST00000597552 NISCHQ9Y2I1 1504 aa24.8■■□□□ 1.56
TIMM50-208ENST00000597552 ABCC9O60706 1549 aa22.43■■□□□ 1.18
TIMM50-208ENST00000597552 CCDC180Q9P1Z9 1646 aa22.15■■□□□ 1.14
TIMM50-208ENST00000597552 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
TIMM50-208ENST00000597552 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
TIMM50-208ENST00000597552 DCAF8L2P0C7V8 631 aa20.97■□□□□ 0.95
TIMM50-208ENST00000597552 NACADO15069 1562 aa20.94■□□□□ 0.94
TIMM50-208ENST00000597552 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
TIMM50-208ENST00000597552 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
TIMM50-208ENST00000597552 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
TIMM50-208ENST00000597552 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.88
TIMM50-208ENST00000597552 BICRAQ9NZM4 1560 aa20.55■□□□□ 0.88
TIMM50-208ENST00000597552 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
TIMM50-208ENST00000597552 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
TIMM50-208ENST00000597552 CECR2Q9BXF3 1484 aa20.22■□□□□ 0.83
TIMM50-208ENST00000597552 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
TIMM50-208ENST00000597552 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
TIMM50-208ENST00000597552 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.8
TIMM50-208ENST00000597552 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
TIMM50-208ENST00000597552 CUX2O14529 1486 aa19.38■□□□□ 0.69
TIMM50-208ENST00000597552 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
TIMM50-208ENST00000597552 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
TIMM50-208ENST00000597552 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
TIMM50-208ENST00000597552 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
TIMM50-208ENST00000597552 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
TIMM50-208ENST00000597552 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
TIMM50-208ENST00000597552 NESP48681 1621 aa19.18■□□□□ 0.66
TIMM50-208ENST00000597552 MROH2BQ7Z745 1585 aa19.16■□□□□ 0.66
TIMM50-208ENST00000597552 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
TIMM50-208ENST00000597552 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
TIMM50-208ENST00000597552 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
TIMM50-208ENST00000597552 WIZO95785 1651 aa18.98■□□□□ 0.63
TIMM50-208ENST00000597552 THOC2Q8NI27 1593 aaKnown RBP18.95■□□□□ 0.62
TIMM50-208ENST00000597552 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
TIMM50-208ENST00000597552 PDS5BQ9NTI5 1447 aa18.9■□□□□ 0.62
TIMM50-208ENST00000597552 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
TIMM50-208ENST00000597552 KIF21AQ7Z4S6 1674 aa18.83■□□□□ 0.61
TIMM50-208ENST00000597552 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
TIMM50-208ENST00000597552 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
TIMM50-208ENST00000597552 MRC2Q9UBG0 1479 aa18.72■□□□□ 0.59
TIMM50-208ENST00000597552 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
TIMM50-208ENST00000597552 WDR62O43379 1518 aa18.66■□□□□ 0.58
TIMM50-208ENST00000597552 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
TIMM50-208ENST00000597552 FANCD2Q9BXW9 1451 aa18.57■□□□□ 0.56
TIMM50-208ENST00000597552 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
TIMM50-208ENST00000597552 CFTRP13569 1480 aa18.52■□□□□ 0.55
TIMM50-208ENST00000597552 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
TIMM50-208ENST00000597552 PRDM2Q13029 1718 aa18.43■□□□□ 0.54
TIMM50-208ENST00000597552 URB2Q14146 1524 aaKnown RBP18.43■□□□□ 0.54
TIMM50-208ENST00000597552 ZNF608Q9ULD9 1512 aaPredicted RBP18.27■□□□□ 0.51
TIMM50-208ENST00000597552 RIMBP3CA6NJZ7 1639 aa18.24■□□□□ 0.51
TIMM50-208ENST00000597552 RIMBP3BA6NNM3 1639 aa18.24■□□□□ 0.51
TIMM50-208ENST00000597552 RIMBP3Q9UFD9 1639 aa18.24■□□□□ 0.51
TIMM50-208ENST00000597552 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
TIMM50-208ENST00000597552 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
TIMM50-208ENST00000597552 TOPBP1Q92547 1522 aa18.18■□□□□ 0.5
TIMM50-208ENST00000597552 ARHGEF11O15085 1522 aa18.18■□□□□ 0.5
TIMM50-208ENST00000597552 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
TIMM50-208ENST00000597552 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
TIMM50-208ENST00000597552 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
TIMM50-208ENST00000597552 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.491e-8■■■■□ 24
TIMM50-208ENST00000597552 FBLN2P98095 1184 aa18.09■□□□□ 0.49
TIMM50-208ENST00000597552 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.48
TIMM50-208ENST00000597552 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
TIMM50-208ENST00000597552 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
TIMM50-208ENST00000597552 TARBP1Q13395 1621 aaKnown RBP18.02■□□□□ 0.48
TIMM50-208ENST00000597552 CUX1P39880 1505 aa17.99■□□□□ 0.47
TIMM50-208ENST00000597552 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
TIMM50-208ENST00000597552 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
TIMM50-208ENST00000597552 CHD1O14646 1710 aa17.98■□□□□ 0.47
TIMM50-208ENST00000597552 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
TIMM50-208ENST00000597552 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
TIMM50-208ENST00000597552 SOGA1O94964 1423 aa17.94■□□□□ 0.46
TIMM50-208ENST00000597552 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
TIMM50-208ENST00000597552 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
TIMM50-208ENST00000597552 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
TIMM50-208ENST00000597552 CLASP1Q7Z460 1538 aa17.79■□□□□ 0.44
TIMM50-208ENST00000597552 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
TIMM50-208ENST00000597552 MAGI1Q96QZ7 1491 aaPredicted RBP17.77■□□□□ 0.44
TIMM50-208ENST00000597552 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
TIMM50-208ENST00000597552 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
TIMM50-208ENST00000597552 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
TIMM50-208ENST00000597552 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
TIMM50-208ENST00000597552 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
TIMM50-208ENST00000597552 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
TIMM50-208ENST00000597552 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
TIMM50-208ENST00000597552 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
TIMM50-208ENST00000597552 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
TIMM50-208ENST00000597552 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
TIMM50-208ENST00000597552 ADAMTS12P58397 1594 aa17.58■□□□□ 0.41
TIMM50-208ENST00000597552 ERCC6L2Q5T890 1561 aa17.55■□□□□ 0.4
TIMM50-208ENST00000597552 GRIN2AQ12879 1464 aa17.53■□□□□ 0.4
TIMM50-208ENST00000597552 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
TIMM50-208ENST00000597552 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
TIMM50-208ENST00000597552 NUP160Q12769 1436 aa17.48■□□□□ 0.39
TIMM50-208ENST00000597552 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
TIMM50-208ENST00000597552 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
TIMM50-208ENST00000597552 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
TIMM50-208ENST00000597552 JPH4Q96JJ6 628 aa17.38■□□□□ 0.37
TIMM50-208ENST00000597552 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms