RNA–Protein interactions for RNA: ENST00000588830.1

RPL27-204, Transcript of ribosomal protein L27, humanhuman

TSL 2

Gene RPL27, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27-204ENST00000588830 NISCHQ9Y2I1 1504 aa19.08■□□□□ 0.64
RPL27-204ENST00000588830 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
RPL27-204ENST00000588830 ABCC9O60706 1549 aa16.62■□□□□ 0.25
RPL27-204ENST00000588830 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
RPL27-204ENST00000588830 RB1CC1Q8TDY2 1594 aa15.99■□□□□ 0.15
RPL27-204ENST00000588830 NACADO15069 1562 aa15.97■□□□□ 0.15
RPL27-204ENST00000588830 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
RPL27-204ENST00000588830 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
RPL27-204ENST00000588830 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
RPL27-204ENST00000588830 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
RPL27-204ENST00000588830 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
RPL27-204ENST00000588830 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.06
RPL27-204ENST00000588830 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
RPL27-204ENST00000588830 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
RPL27-204ENST00000588830 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
RPL27-204ENST00000588830 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
RPL27-204ENST00000588830 CC2D2AQ9P2K1 1620 aa15□□□□□ -0.01
RPL27-204ENST00000588830 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
RPL27-204ENST00000588830 DNAJC5Q9H3Z4 198 aa14.85□□□□□ -0.03
RPL27-204ENST00000588830 BAZ1AQ9NRL2 1556 aaPredicted RBP14.8□□□□□ -0.04
RPL27-204ENST00000588830 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
RPL27-204ENST00000588830 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
RPL27-204ENST00000588830 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
RPL27-204ENST00000588830 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
RPL27-204ENST00000588830 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
RPL27-204ENST00000588830 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
RPL27-204ENST00000588830 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
RPL27-204ENST00000588830 PEG3Q9GZU2 1588 aa14.63□□□□□ -0.07
RPL27-204ENST00000588830 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
RPL27-204ENST00000588830 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
RPL27-204ENST00000588830 WIZO95785 1651 aa14.48□□□□□ -0.09
RPL27-204ENST00000588830 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
RPL27-204ENST00000588830 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
RPL27-204ENST00000588830 CADPSQ9ULU8 1353 aa14.36□□□□□ -0.11
RPL27-204ENST00000588830 NESP48681 1621 aa14.35□□□□□ -0.11
RPL27-204ENST00000588830 LAMC3Q9Y6N6 1575 aa14.34□□□□□ -0.11
RPL27-204ENST00000588830 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
RPL27-204ENST00000588830 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
RPL27-204ENST00000588830 CFTRP13569 1480 aa14.24□□□□□ -0.13
RPL27-204ENST00000588830 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
RPL27-204ENST00000588830 CUX2O14529 1486 aa14.21□□□□□ -0.13
RPL27-204ENST00000588830 FANCD2Q9BXW9 1451 aa14.16□□□□□ -0.14
RPL27-204ENST00000588830 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
RPL27-204ENST00000588830 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
RPL27-204ENST00000588830 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
RPL27-204ENST00000588830 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
RPL27-204ENST00000588830 WDR62O43379 1518 aa14.03□□□□□ -0.16
RPL27-204ENST00000588830 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
RPL27-204ENST00000588830 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
RPL27-204ENST00000588830 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
RPL27-204ENST00000588830 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
RPL27-204ENST00000588830 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
RPL27-204ENST00000588830 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
RPL27-204ENST00000588830 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
RPL27-204ENST00000588830 SOGA1O94964 1423 aa13.79□□□□□ -0.2
RPL27-204ENST00000588830 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
RPL27-204ENST00000588830 CUX1P39880 1505 aa13.76□□□□□ -0.21
RPL27-204ENST00000588830 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
RPL27-204ENST00000588830 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
RPL27-204ENST00000588830 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.215e-10■■□□□ 13.4
RPL27-204ENST00000588830 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
RPL27-204ENST00000588830 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
RPL27-204ENST00000588830 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.214e-8■■■■□ 20.1
RPL27-204ENST00000588830 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
RPL27-204ENST00000588830 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
RPL27-204ENST00000588830 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
RPL27-204ENST00000588830 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
RPL27-204ENST00000588830 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
RPL27-204ENST00000588830 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
RPL27-204ENST00000588830 FBLN2P98095 1184 aa13.64□□□□□ -0.23
RPL27-204ENST00000588830 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
RPL27-204ENST00000588830 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
RPL27-204ENST00000588830 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
RPL27-204ENST00000588830 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
RPL27-204ENST00000588830 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
RPL27-204ENST00000588830 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
RPL27-204ENST00000588830 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
RPL27-204ENST00000588830 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
RPL27-204ENST00000588830 SYNJ2O15056 1496 aa13.52□□□□□ -0.25
RPL27-204ENST00000588830 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
RPL27-204ENST00000588830 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
RPL27-204ENST00000588830 ERICH3Q5RHP9 1530 aa13.47□□□□□ -0.25
RPL27-204ENST00000588830 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
RPL27-204ENST00000588830 PBRM1Q86U86 1689 aa13.44□□□□□ -0.26
RPL27-204ENST00000588830 CHD1O14646 1710 aa13.44□□□□□ -0.26
RPL27-204ENST00000588830 IGF1RP08069 1367 aa13.43□□□□□ -0.26
RPL27-204ENST00000588830 GRIN2AQ12879 1464 aa13.4□□□□□ -0.26
RPL27-204ENST00000588830 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
RPL27-204ENST00000588830 ARHGEF11O15085 1522 aa13.37□□□□□ -0.27
RPL27-204ENST00000588830 CARMIL1Q5VZK9 1371 aa13.35□□□□□ -0.27
RPL27-204ENST00000588830 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
RPL27-204ENST00000588830 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
RPL27-204ENST00000588830 NUP160Q12769 1436 aa13.35□□□□□ -0.27
RPL27-204ENST00000588830 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
RPL27-204ENST00000588830 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
RPL27-204ENST00000588830 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
RPL27-204ENST00000588830 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
RPL27-204ENST00000588830 CUL7Q14999 1698 aa13.31□□□□□ -0.28
RPL27-204ENST00000588830 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
RPL27-204ENST00000588830 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms