Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 AC087623.3-201ENST00000607047 1098 ntBASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 AC008694.1-202ENST00000636953 945 ntBASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 AC010980.2-201ENST00000587099 1412 ntBASIC18.49■□□□□ 0.55
RUNDC3AQ59EK9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 AC018553.1-201ENST00000616682 1458 ntBASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 AC016769.1-201ENST00000409132 1010 ntBASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 KRT18P5-201ENST00000436075 1291 ntBASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RUNDC3AQ59EK9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 CROCCP3-202ENST00000420820 1947 ntBASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RUNDC3AQ59EK9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 KRT17P1-201ENST00000399211 1546 ntBASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 AC006015.1-201ENST00000429970 570 ntBASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 OR10C1-204ENST00000622521 1039 ntBASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RUNDC3AQ59EK9 AC116351.2-201ENST00000606540 1585 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms